I am not sure we have a walkthrough for Torque specifically - but if you have Galaxy up and running and you can qsub commands to torque - hopefully you have done all of the hard parts.
You will need a DRMAA library for your torque setup - https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster suggests compiling pbs_drmaa and outlines how to set it up. After that you just need to add a plugin and default destination to your job_conf.xml file - also outlined on that wiki page. Other good resources to consult if you are scaling up your Galaxy this way are: https://wiki.galaxyproject.org/Admin/Config/Performance/ProductionServer https://wiki.galaxyproject.org/Events/GCC2014/TrainingDay/AdminWalkthrough Good luck and let us know if you encounter any problems. -John On Fri, Nov 21, 2014 at 2:30 PM, Fernandez Edgar <edgar.fernan...@umontreal.ca> wrote: > Hello all, > > > > My name is Edgar Fernandez. I’m a sys. admin. at University of Montreal. > > I’ve contacted you a while back about installing galaxy and I’ve > successfully done it on a redhat 6 server. > > > > I see myself in a situation where I need to utilise all my redhat servers > (who are identical to the server running the galaxy website). > > > > I’ve also successfully installed a server torque with compute notes and > clients nodes. > > > > What are the last step to make the link between galaxy and torque? > > Also, once that connection is made, how will galaxy keep track of the jobs > sent? > > I mean who will it know this job that just finished is for this user and not > another ? > > > > Also, my torque installation is so that my server running galaxy is a submit > node and a client node. > > I hope this is not a problem. > > > > Please help! > > > > Cordialement / Regards, > > > > Edgar Fernandez > > System Administrator (Linux) > > Direction Générale des Technologies de l'Information et de la Communication > > ( Bur. : 1-514-343-6111 poste 16568 > > > > Université de Montréal > > PAVILLON ROGER-GAUDRY, bureau X-218 > > > > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
