Hi Marco, No problem - I originally copied the metadata access trick from one of the Galaxy dev-team's tool anyway.
Maybe we need to add this to the wiki... Peter On Tuesday, January 13, 2015, Marco Albuquerque < marcoalbuquerque....@gmail.com> wrote: > Hi Peter, > > I was unaware of how to access metadata, that seemed to be my issue. The > tool works now though! > > Thanks so much, > > Marco > > > > > On 2015-01-09 7:13 PM, "Peter Cock" <p.j.a.c...@googlemail.com > <javascript:;>> wrote: > > > >I think the symlink approach is best, see for example the Python > >wrapper script I used here for "samtools idxstats", > > > https://github.com/peterjc/pico_galaxy/tree/master/tools/samtools_idxstats > > > >However, you can make the link in the XML directly, see Dave's > >reworking of this wrapper: > > > https://github.com/galaxyproject/tools-devteam/tree/master/tool_collection > >s/samtools/samtools_idxstats > > > >Regards, > > > >Peter > > >
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