Hi Bjoern, it's stored in the same folder as the .xml Hi Gildas, that is the tool.
Thanks! On Tue, Feb 23, 2016 at 12:43 PM, Gildas Le Corguillé < lecorgui...@sb-roscoff.fr> wrote: > Is it this tool : > https://testtoolshed.g2.bx.psu.edu/view/xianrong/removing_consecutive_bins_with_same_score/c19a0a942e1b > > Gildas > > ----------------------------------------------------------------- > Gildas Le Corguillé - Bioinformatician/Bioanalyste > Plateforme ABiMS (Analyses and Bioinformatics for Marine Science) > > Station Biologique de Roscoff - UPMC/CNRS - FR2424 > Place Georges Teissier 29680 Roscoff FRANCE > tel: +33 2 98 29 23 81 > http://abims.sb-roscoff.fr > ------------------------------------------------------------------ > > > > Le 23 févr. 2016 à 18:35, Björn Grüning <bjoern.gruen...@gmail.com> a > écrit : > > Hi, > > is the script rm_consecutive_sameScore.pl part of your TS repo and next > to your tool XML file or where is it stored? > > Thanks, > Bjoern > > Am 23.02.2016 um 17:46 schrieb Xianrong Wong: > > Hi, I'm new to publishing tools/repository on the toolshed. I have used > planemo and lint and tests as well as serve all worked. I was able to > use the tool. However, when I uploaded it onto the test tool shed and > imported the tool on a cloud instance, I keep getting this error when > running job: > > Fatal error: Exit code 2 () Can't open perl script > "rm_consecutive_sameScore.pl": No such file or directory > > > > Please advise! I've been downloading and looking at what others did but > I still can't figure this out. > > > > I've attached my .xml file and here are some of the commands I used to > upload the tool. > > planemo shed_create --shed_target testtoolshed > > > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ > > >
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