Hi Scott, The quick fix is to source your virtualenv first and you should be good to go.
-Dannon On Fri, May 20, 2016 at 9:07 AM Scott Szakonyi <scott.b.szakony...@nd.edu> wrote: > Hi all, > > I'm getting an error when executing the cleanup scripts in Galaxy 16.01. > It appears the script is unable to import sqlalchemy, but my understanding > is that Galaxy can't function without it, so I'm at a loss to explain. > Here's the error I'm getting: > > $ sh scripts/cleanup_datasets/delete_userless_histories.sh > Traceback (most recent call last): > File "./scripts/cleanup_datasets/cleanup_datasets.py", line 13, in > <module> > import sqlalchemy as sa > ImportError: No module named sqlalchemy > > > We have relatively limited space on our storage server, so it's imperative > that I be able to execute these scripts and be able to clean up deleted > material. I welcome any suggestions. > > Best regards, > > -- > Scott B. Szakonyi > Research Programmer > > *Center for Research Computing* > 107 Information Technology Center > Notre Dame, IN 46556 > http://crc.nd.edu > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/
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