Sorry, I'm late to the thread -- one more question: How many columns are in the file?
Galaxy will only display tabular datasets with fewer than 50 columns using the 'fancy' display which also loads the file incrementally and renders on demand. For very 'wide' files, Galaxy defaults to using the original tabular file display which is what you're seeing -- just serving the raw data, or, in the case of large files, only the first 1MB. There's an issue on Github (or more likely, Trello, still) about creating a more suitable "Matrix" view that'd work for files like these but that's work that has not been done yet. -Dannon On Tue, May 31, 2016 at 8:18 AM Carl Eberhard <carlfeberh...@gmail.com> wrote: > Strange. Alright, a few questions then: > > * Is this the only file that this happens to? Do other outputs from this > tool produce the same sort of error? > * Do you see any javascript errors in the console when attempting the > viewing? (how to here: http://webmasters.stackexchange.com/a/77337) > > On Fri, May 27, 2016 at 12:42 PM, Ryan G <ngsbioinformat...@gmail.com> > wrote: > >> The format is listed as tabular when I view details. >> >> In fact, in the preview window in the History Pane, it recognizes there >> are columns and that the data is in fact tabular, but when displaying, this >> isn't the case. >> >> >> >> On Tue, May 24, 2016 at 4:20 PM, Carl Eberhard <carlfeberh...@gmail.com> >> wrote: >> >>> Ok - if it's not zebra striped and it's word wrapping, then it's somehow >>> not displaying as tabular - you're correct. >>> >>> If you click on the 'View details' button of that dataset (the 'i' with >>> the circle around it shown when the dataset is expanded in the right hand >>> side of the 'Analyze Data' page), what does it list the 'Format' as? >>> 'tabular'? (This is also listed as 'Format' in the expanded view itself). >>> >>> On Mon, May 23, 2016 at 5:33 PM, Ryan G <ngsbioinformat...@gmail.com> >>> wrote: >>> >>>> Odd because I have another tabular file that is displayed with every >>>> other line highlighted and there is not word-wrapping on the file. However >>>> the file that has the type tabular and displayed as text is word-wrapped >>>> with no lines highlighted. I suspect its not actually recognized as >>>> tabular or is being overridden where. >>>> >>>> >>>> On Thu, Nov 12, 2015 at 10:23 AM, Carl Eberhard < >>>> carlfeberh...@gmail.com> wrote: >>>> >>>>> Hi, Ryan >>>>> >>>>> Galaxy displays tabular data in the browser using a <table> tag. It >>>>> *sounds like* the behavior you see (columns losing space between one >>>>> another when narrowing the window and getting more space as you expand the >>>>> window) would reflect that. >>>>> >>>>> Carl >>>>> >>>>> On Wed, Oct 28, 2015 at 1:23 PM, Ryan G <ngsbioinformat...@gmail.com> >>>>> wrote: >>>>> >>>>>> The file is an output from a tool and in the tool's xml, its format >>>>>> is tabular. >>>>>> >>>>>> >>>>>> >>>>>> On Tue, Oct 27, 2015 at 3:43 AM, Björn Grüning < >>>>>> bjoern.gruen...@gmail.com> wrote: >>>>>> >>>>>>> Hi Ryan, >>>>>>> >>>>>>> is it recognised as 'tabular'? >>>>>>> >>>>>>> Ciao, >>>>>>> Bjoern >>>>>>> >>>>>>> Am 27.10.2015 um 04:42 schrieb Ryan G: >>>>>>> > Hi - I have a tools that generates a tab-delimited text file as >>>>>>> output. >>>>>>> > when I click the eye icon to view the data, all the fields are >>>>>>> compressed >>>>>>> > as if there were no tabs. If I expand the history view, the >>>>>>> little preview >>>>>>> > window shows the contents as tabbed. I've verified that the >>>>>>> spaces are >>>>>>> > indeed '\t' tab characters. Why would Galaxy not display this >>>>>>> file as a >>>>>>> > tab-delimited file? >>>>>>> > >>>>>>> > >>>>>>> > >>>>>>> > ___________________________________________________________ >>>>>>> > Please keep all replies on the list by using "reply all" >>>>>>> > in your mail client. To manage your subscriptions to this >>>>>>> > and other Galaxy lists, please use the interface at: >>>>>>> > https://lists.galaxyproject.org/ >>>>>>> > >>>>>>> > To search Galaxy mailing lists use the unified search at: >>>>>>> > http://galaxyproject.org/search/mailinglists/ >>>>>>> > >>>>>>> >>>>>> >>>>>> >>>>>> ___________________________________________________________ >>>>>> Please keep all replies on the list by using "reply all" >>>>>> in your mail client. To manage your subscriptions to this >>>>>> and other Galaxy lists, please use the interface at: >>>>>> https://lists.galaxyproject.org/ >>>>>> >>>>>> To search Galaxy mailing lists use the unified search at: >>>>>> http://galaxyproject.org/search/mailinglists/ >>>>>> >>>>> >>>>> >>>> >>> >> > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
