On Fri, Aug 26, 2016 at 10:42 AM, Katherine Beaulieu < katherine.beaulieu...@gmail.com> wrote:
> Hi Peter, > I think I did not explain myself well. I meant that if I have a tool that > takes multiple file paths and outputs multiple Galaxy datasets to the > history, would this tool be workflow compatible, meaning capable of being a > part of any workflow? From the behaviour I am getting now I am assuming it > isn't but I just wanted to confirm that this isn't supported functionality. > > On Fri, Aug 26, 2016 at 10:34 AM, Peter Cock <p.j.a.c...@googlemail.com> > wrote: > >> Hi Katherine, >> >> Are you asking about compatibility staying on the same Galaxy >> instance, or the harder problem of compatibility sharing workflows >> between Galaxy servers? >> >> Taking data from input Galaxy datasets should be fine, anything else >> may not be portable. Even the relatively simple case of using >> datafiles referenced via an example.loc file (e.g. BLAST databases) >> would require the entries in the example.loc file be synchronised >> between Galaxy instances, and the associated data files too. >> >> Peter >> >> >> On Fri, Aug 26, 2016 at 1:27 PM, Katherine Beaulieu >> <katherine.beaulieu...@gmail.com> wrote: >> > Hi Everyone, >> > Would anyone be able to tell me the conditions which would make a tool >> > non-workflow compatible? I have a tool that imports files from a third >> party >> > application and auto-detects the file format. There is also the option >> to >> > upload multiple files at once so the tool always uploads at least two >> files. >> > From what I have described can anyone see why this tool would not be >> able to >> > send one of its files to the next tool in the chain, ex. a text >> manipulation >> > tool? >> > Thanks, >> > Katherine >> > >> > ___________________________________________________________ >> > Please keep all replies on the list by using "reply all" >> > in your mail client. To manage your subscriptions to this >> > and other Galaxy lists, please use the interface at: >> > https://lists.galaxyproject.org/ >> > >> > To search Galaxy mailing lists use the unified search at: >> > http://galaxyproject.org/search/mailinglists/ >> > >
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