Hi Peter,

yes this is working :)
Usegalaxy.eu is using it for a few tools.

Documentation is here ;) https://github.com/galaxyproject/galaxy/blob/dev/config/job_conf.xml.sample_advanced#L484

Also the Docker compose image is can also use Singularity if you want to reverse engineer it :)

Ciao,
Bjoern

Am 19.09.2018 um 10:12 schrieb Peter van Heusden:
Hi there

Is it possible to use Singularity images to resolve dependencies in Galaxy 18.05? If so is there documentation somewhere?

I have a Galaxy server where for at least some of the dependencies conda will not be a good option so I would like to be able to use singularity if at all possible.

Thanks!
Peter


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
   https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
   http://galaxyproject.org/search/

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
 https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
 http://galaxyproject.org/search/

Reply via email to