Hello Mike,
Yes, we have similar recent reports of issues with tools from this group
and are actively investigating the root cause. It is unknown whether or
not python version is related, but right now we are tracking the issues
under a single ticket with that as a suspected contributing factor. You
can follow this ticket, and any tickets that branch from it, here:
https://trello.com/c/yXrDICmg
Our apologies for the current inconvenience,
Jen
Galaxy team
On 2/23/14 2:40 PM, Mike Montague wrote:
I'm interested in using the Genomic Diversity tools. I've used these
with success for a previous project. For this current project, I've
converted a vcf file (29 subjects) to a gd_genotype file. When I
attempt to specify individuals, the checkboxes for each subject are
not present. Without specifying individuals, I am unable to complete
other analyses (overall FST, etc.)
I cannot distinguish a difference between the vcf files that were
successful from the previous project and this current project's vcf,
but I assume there is a format difference that I cannot detect.
I'm using Galaxy at the main site. I executed the jobs on Fri Feb 21
22:09:49 2014 (UTC). I can share the histories of the projects if
necessary.
Mike
--
Jennifer Hillman-Jackson
http://galaxyproject.org
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