Revision: 14613
http://gate.svn.sourceforge.net/gate/?rev=14613&view=rev
Author: nirajaswani
Date: 2011-11-26 23:38:08 +0000 (Sat, 26 Nov 2011)
Log Message:
-----------
couple of fixes: now all documents closes properly, save as a single xml works
nicely
Modified Paths:
--------------
gate/trunk/plugins/Alignment/src/gate/alignment/gui/AlignmentEditor.java
gate/trunk/plugins/Alignment/src/gate/compound/gui/CompoundDocumentEditor.java
gate/trunk/plugins/Alignment/src/gate/compound/impl/AbstractCompoundDocument.java
Modified:
gate/trunk/plugins/Alignment/src/gate/alignment/gui/AlignmentEditor.java
===================================================================
--- gate/trunk/plugins/Alignment/src/gate/alignment/gui/AlignmentEditor.java
2011-11-26 02:17:45 UTC (rev 14612)
+++ gate/trunk/plugins/Alignment/src/gate/alignment/gui/AlignmentEditor.java
2011-11-26 23:38:08 UTC (rev 14613)
@@ -29,7 +29,6 @@
import java.awt.event.ActionListener;
import java.awt.event.FocusEvent;
import java.awt.event.FocusListener;
-import java.awt.event.MouseAdapter;
import java.awt.event.MouseEvent;
import java.awt.event.MouseListener;
import java.awt.event.MouseMotionListener;
@@ -72,8 +71,7 @@
import javax.swing.text.DefaultHighlighter.DefaultHighlightPainter;
/**
- * This class provides an editor for aligning texts in a compound
- * document.
+ * This class provides an editor for aligning texts in a compound document.
*/
public class AlignmentEditor extends JFrame implements FeatureMapListener,
DocumentListener {
@@ -84,8 +82,8 @@
AlignmentEditor editor = null;
/**
- * Menus for creating new alignment tasks, setting up active learning
- * setup, specifying user preferences etc.
+ * Menus for creating new alignment tasks, setting up active learning setup,
+ * specifying user preferences etc.
*/
JMenuBar menubar;
@@ -180,28 +178,29 @@
private static final int MOUSE_MOVEMENT_TIMER_DELAY = 300;
/**
- * Action that should be taken when the mouse has stopped moving and
- * is on one of the highlights
+ * Action that should be taken when the mouse has stopped moving and is on
one
+ * of the highlights
*/
protected MouseStoppedMovingAction mouseStoppedMovingAction;
/**
* Highlight used for highlighting aligned annotations.
*/
- final DefaultHighlighter.DefaultHighlightPainter HIGHLIGHT = new
DefaultHighlighter.DefaultHighlightPainter(
+ final DefaultHighlighter.DefaultHighlightPainter HIGHLIGHT =
+ new DefaultHighlighter.DefaultHighlightPainter(
getColor(Color.GREEN, 0.1f));
/**
* Highlight used for highlighting selected aligned annotations.
*/
- final DefaultHighlighter.DefaultHighlightPainter SELECTED_HIGHLIGHT = new
DefaultHighlighter.DefaultHighlightPainter(
- getColor(Color.RED, 0.5f));
+ final DefaultHighlighter.DefaultHighlightPainter SELECTED_HIGHLIGHT =
+ new DefaultHighlighter.DefaultHighlightPainter(getColor(Color.RED,
0.5f));
/**
* Highlight used for highlighting selected aligned annotations.
*/
- final DefaultHighlighter.DefaultHighlightPainter PROCESSING_HIGHLIGHT = new
DefaultHighlighter.DefaultHighlightPainter(
- getColor(Color.BLUE, 0.5f));
+ final DefaultHighlighter.DefaultHighlightPainter PROCESSING_HIGHLIGHT =
+ new DefaultHighlighter.DefaultHighlightPainter(getColor(Color.BLUE,
0.5f));
/**
* Color generator used for generatig color
@@ -221,7 +220,8 @@
/**
* Stores alignment tasks objects
*/
- private Map<String, AlignmentTask> alignmentTasks = new HashMap<String,
AlignmentTask>();
+ private Map<String, AlignmentTask> alignmentTasks =
+ new HashMap<String, AlignmentTask>();
/**
* The current alignment task that is being shown on the screen
@@ -229,10 +229,11 @@
private AlignmentTask currentAT = null;
/**
- * every alignment task has a view associated with it. This map is
- * used for storing the reference
+ * every alignment task has a view associated with it. This map is used for
+ * storing the reference
*/
- private HashMap<AlignmentTask, AlignmentTaskView> alignmentTaskViews = new
HashMap<AlignmentTask, AlignmentTaskView>();
+ private HashMap<AlignmentTask, AlignmentTaskView> alignmentTaskViews =
+ new HashMap<AlignmentTask, AlignmentTaskView>();
/**
* Alignment task panel
@@ -287,7 +288,6 @@
srcDoc.addDocumentListener(this);
tgtDoc.addDocumentListener(this);
- Document doc = this.document.getCurrentDocument();
this.document.getFeatures().addFeatureMapListener(this);
}
@@ -304,18 +304,16 @@
public void cleanup() {
// delete document listeners and feature update listener
- if(this.srcDoc != null)
- this.srcDoc.removeDocumentListener(this);
-
- if(this.tgtDoc != null)
- this.tgtDoc.removeDocumentListener(this);
-
+ if(this.srcDoc != null) this.srcDoc.removeDocumentListener(this);
+
+ if(this.tgtDoc != null) this.tgtDoc.removeDocumentListener(this);
+
this.document.getFeatures().removeFeatureMapListener(this);
}
/**
- * Introduces transparency to the given color. If c is null, a new
- * random color is generated using the color generater class.
+ * Introduces transparency to the given color. If c is null, a new random
+ * color is generated using the color generater class.
*
* @param c
* @return
@@ -326,8 +324,8 @@
components = colorGenerator.getNextColor().getComponents(null);
else components = c.getComponents(null);
- Color colour = new Color(components[0], components[1], components[2],
- alphaValue);
+ Color colour =
+ new Color(components[0], components[1], components[2], alphaValue);
int rgb = colour.getRGB();
int alpha = colour.getAlpha();
int rgba = rgb | (alpha << 24);
@@ -398,8 +396,8 @@
/**
* Obtain all the alignment feature names
*/
- List<String> alignmentFeatureNames = new ArrayList<String>(document
- .getAllAlignmentFeatureNames());
+ List<String> alignmentFeatureNames =
+ new ArrayList<String>(document.getAllAlignmentFeatureNames());
this.alignmentFeatures = new JComboBox(alignmentFeatureNames.toArray());
controls.add(new JLabel("Alignment Features:"));
@@ -417,7 +415,8 @@
controls.add(refreshHighlights);
mouseStoppedMovingAction = new MouseStoppedMovingAction();
- mouseMovementTimer = new javax.swing.Timer(MOUSE_MOVEMENT_TIMER_DELAY,
+ mouseMovementTimer =
+ new javax.swing.Timer(MOUSE_MOVEMENT_TIMER_DELAY,
mouseStoppedMovingAction);
mouseMovementTimer.setRepeats(false);
alignmentTaskPanel = new JPanel();
@@ -448,7 +447,8 @@
// add new highlights
if(pair.sourceAnnotations != null) {
for(Annotation a : pair.sourceAnnotations) {
- Object o = sourceEditor.getHighlighter().addHighlight(
+ Object o =
+ sourceEditor.getHighlighter().addHighlight(
a.getStartNode().getOffset().intValue(),
a.getEndNode().getOffset().intValue(), PROCESSING_HIGHLIGHT);
srcSelectedHighlights.add(o);
@@ -458,14 +458,14 @@
// add new highlights
if(pair.targetAnnotations != null) {
for(Annotation a : pair.targetAnnotations) {
- Object o = targetEditor.getHighlighter().addHighlight(
+ Object o =
+ targetEditor.getHighlighter().addHighlight(
a.getStartNode().getOffset().intValue(),
a.getEndNode().getOffset().intValue(), PROCESSING_HIGHLIGHT);
tgtSelectedHighlights.add(o);
}
}
- }
- catch(BadLocationException e) {
+ } catch(BadLocationException e) {
throw new GateRuntimeException(e);
}
}
@@ -474,7 +474,6 @@
* Action to show the next pair
*
* @author niraj
- *
*/
class NextPairAction extends AbstractAction {
@@ -501,16 +500,14 @@
// ask this only if the pair hasn't been marked as finished
if(!task.current().isAlignmentFinished()) {
- int answer = JOptionPane.showConfirmDialog(editor,
+ int answer =
+ JOptionPane.showConfirmDialog(editor,
"Is alignment complete for this pair?");
if(answer == JOptionPane.YES_OPTION) {
task.getAlignmentActionsManager().executeFinishedAlignmentActions(
- task.current());
+ task.current());
task.current().setAlignmentFinished(true);
- }
- else if(answer == JOptionPane.CANCEL_OPTION) {
- return;
- }
+ } else if(answer == JOptionPane.CANCEL_OPTION) { return; }
}
}
@@ -519,8 +516,7 @@
task.getAlignmentActionsManager().executePreDisplayActions(pair);
highlightParentAnnotations(pair);
view.updateView(pair);
- }
- else {
+ } else {
JOptionPane.showMessageDialog(editor, "Reached End of the Document");
}
}
@@ -530,7 +526,6 @@
* Shows the previous pair
*
* @author niraj
- *
*/
class PreviousPairAction extends AbstractAction {
@@ -548,24 +543,21 @@
// ask this only if the pair hasn't been marked as finished
if(!task.current().isAlignmentFinished()) {
- int answer = JOptionPane.showConfirmDialog(editor,
+ int answer =
+ JOptionPane.showConfirmDialog(editor,
"Is alignment complete for this pair?");
if(answer == JOptionPane.YES_OPTION) {
task.getAlignmentActionsManager().executeFinishedAlignmentActions(
- task.current());
+ task.current());
task.current().setAlignmentFinished(true);
- }
- else if(answer == JOptionPane.CANCEL_OPTION) {
- return;
- }
+ } else if(answer == JOptionPane.CANCEL_OPTION) { return; }
}
if(task.hasPrevious()) {
PUAPair pair = task.previous();
highlightParentAnnotations(pair);
view.updateView(pair);
- }
- else {
+ } else {
JOptionPane.showMessageDialog(editor, "Reached Start of the Document");
}
}
@@ -575,7 +567,6 @@
* Create a new alignment task
*
* @author niraj
- *
*/
class NewAlignmentTaskAction extends AbstractAction {
@@ -588,7 +579,7 @@
if(alignmentTask == null) return;
alignmentTasks.put(alignmentTask.getName(), alignmentTask);
alignmentTasksMenu.add(new SwitchAlignmentTaskAction(alignmentTask
- .getName()));
+ .getName()));
currentAT = alignmentTask;
// updateGUI
@@ -657,8 +648,8 @@
for(int i = 0; i < alignmentTasksMenu.getItemCount(); i++) {
JMenuItem mi = alignmentTasksMenu.getItem(i);
- SwitchAlignmentTaskAction sata = (SwitchAlignmentTaskAction)mi
- .getAction();
+ SwitchAlignmentTaskAction sata =
+ (SwitchAlignmentTaskAction)mi.getAction();
if(sata.taskName.equals(currentAT.getName())) {
alignmentTasksMenu.remove(mi);
alignmentTasksMenu.updateUI();
@@ -694,7 +685,7 @@
currentAT = AlignmentTask.fromXML(document,
selected.getAbsolutePath());
alignmentTasks.put(currentAT.getName(), currentAT);
alignmentTasksMenu.add(new SwitchAlignmentTaskAction(currentAT
- .getName()));
+ .getName()));
// updateGUI
alignmentTaskPanel.removeAll();
@@ -748,8 +739,8 @@
public void focusGained(FocusEvent e) {
if(reload) {
JOptionPane
- .showMessageDialog(editor,
- "Alignment information has changed - the document
will be refreshed!");
+ .showMessageDialog(editor,
+ "Alignment information has changed - the document will be
refreshed!");
reload = false;
// execute the refreshHighlight action
@@ -786,15 +777,18 @@
if(selectedIndex == -1) return;
boolean isDefault = srcAnnotationSets.getSelectedIndex() == 0;
- srcAS = isDefault ? srcDoc.getAnnotations() : srcDoc
+ srcAS =
+ isDefault ? srcDoc.getAnnotations() : srcDoc
.getAnnotations((String)srcAnnotationSets.getSelectedItem());
isDefault = tgtAnnotationSets.getSelectedIndex() == 0;
- tgtAS = isDefault ? tgtDoc.getAnnotations() : tgtDoc
+ tgtAS =
+ isDefault ? tgtDoc.getAnnotations() : tgtDoc
.getAnnotations((String)tgtAnnotationSets.getSelectedItem());
// obtain the alignment object
- alignment = document.getAlignmentInformation((String)alignmentFeatures
+ alignment =
+ document.getAlignmentInformation((String)alignmentFeatures
.getSelectedItem());
refreshHighlights();
@@ -813,8 +807,7 @@
}
/**
- * Adds highlights to the document - indicating which annotations are
- * aligned
+ * Adds highlights to the document - indicating which annotations are aligned
*
* @param alignment
* @param editorPane
@@ -836,13 +829,12 @@
* @param painter
*/
private Object addHighlight(Annotation a, JTextArea editorPane,
- DefaultHighlightPainter painter) {
+ DefaultHighlightPainter painter) {
try {
return editorPane.getHighlighter().addHighlight(
- a.getStartNode().getOffset().intValue(),
- a.getEndNode().getOffset().intValue(), painter);
- }
- catch(BadLocationException e) {
+ a.getStartNode().getOffset().intValue(),
+ a.getEndNode().getOffset().intValue(), painter);
+ } catch(BadLocationException e) {
throw new GateRuntimeException(e);
}
}
@@ -892,22 +884,20 @@
Rectangle viewLocation = textPane.modelToView(textLocation);
// expand the rectangle a bit
int error = 10;
- viewLocation = new Rectangle(viewLocation.x - error, viewLocation.y
- - error, viewLocation.width + 2 * error, viewLocation.height
- + 2 * error);
+ viewLocation =
+ new Rectangle(viewLocation.x - error, viewLocation.y - error,
+ viewLocation.width + 2 * error, viewLocation.height + 2 *
error);
if(viewLocation.contains(e.getPoint())) {
mouseStoppedMovingAction.setTextLocation(textLocation);
mouseStoppedMovingAction.setEditorPane(textPane);
- }
- else {
+ } else {
mouseStoppedMovingAction.setTextLocation(-1);
}
}
catch(BadLocationException e1) {
// don't do anything
- }
- finally {
+ } finally {
mouseMovementTimer.restart();
}
}
@@ -918,22 +908,22 @@
public void mouseClicked(MouseEvent e) {
// do nothing
-
+
}
public void mouseEntered(MouseEvent e) {
// do nothing
-
+
}
public void mousePressed(MouseEvent e) {
// do nothing
-
+
}
public void mouseReleased(MouseEvent e) {
// do nothing
-
+
}
}
@@ -946,13 +936,14 @@
/**
* types of views we support
*/
- private final String[] VIEWS = new String[] {LINKS_VIEW, MATRIX_VIEW,
+ private final String[] VIEWS = new String[]{LINKS_VIEW, MATRIX_VIEW,
PARALLEL_VIEW};
private AlignmentTask createAlignmentTask() {
JPanel mainPanel = new JPanel(new GridBagLayout());
// two combo-boxes
- JTextField taskName = new JTextField("AlignmentTask"
+ JTextField taskName =
+ new JTextField("AlignmentTask"
+ ("" + Math.random() * 5000).substring(0, 4), 25);
JTextField unitOfAlignment = new JTextField("Token", 25);
JTextField parentOfUnitOfAlignment = new JTextField("Sentence", 25);
@@ -1109,9 +1100,8 @@
if(result == JFileChooser.APPROVE_OPTION) {
try {
actionsFile.setText(fileChooser.getSelectedFile().toURI().toURL()
- .toExternalForm());
- }
- catch(Exception e) {
+ .toExternalForm());
+ } catch(Exception e) {
actionsFile.setText("");
}
}
@@ -1119,24 +1109,23 @@
}
});
- int returnValue = JOptionPane.showOptionDialog(editor.getContentPane(),
- mainPanel, "New Alignment Task", JOptionPane.PLAIN_MESSAGE,
+ int returnValue =
+ JOptionPane.showOptionDialog(editor.getContentPane(), mainPanel,
+ "New Alignment Task", JOptionPane.PLAIN_MESSAGE,
JOptionPane.OK_CANCEL_OPTION, MainFrame.getIcon("annotation-diff"),
- new String[] {"OK", "Cancel"}, "OK");
+ new String[]{"OK", "Cancel"}, "OK");
if(returnValue == JOptionPane.OK_OPTION) {
AlignmentTask alignmentTask = new AlignmentTask(document);
File actionsConfFile = null;
if(actionsFile.getText().trim().length() > 0) {
try {
- actionsConfFile = new File(new URL(actionsFile.getText().trim())
- .toURI());
- }
- catch(MalformedURLException e) {
+ actionsConfFile =
+ new File(new URL(actionsFile.getText().trim()).toURI());
+ } catch(MalformedURLException e) {
e.printStackTrace();
actionsConfFile = null;
- }
- catch(URISyntaxException e) {
+ } catch(URISyntaxException e) {
e.printStackTrace();
actionsConfFile = null;
}
@@ -1145,29 +1134,25 @@
// MainFrame.lockGUI("Initializing alignment task : "+
// taskName.getText()+"... ");
try {
- alignmentTask.initialize(taskName.getText(), srcDoc.getName(), tgtDoc
- .getName(), (String)srcAnnotationSets.getSelectedItem(),
- (String)tgtAnnotationSets.getSelectedItem(), unitOfAlignment
- .getText(), parentOfUnitOfAlignment.getText(),
- (String)dataSources.getSelectedItem(), (String)storeAlignmentIn
- .getSelectedItem(), (String)viewsToSelectFrom
- .getSelectedItem(), actionsConfFile == null
- ? null
- : actionsConfFile.getAbsolutePath());
- }
- finally {
+ alignmentTask.initialize(taskName.getText(), srcDoc.getName(),
+ tgtDoc.getName(), (String)srcAnnotationSets.getSelectedItem(),
+ (String)tgtAnnotationSets.getSelectedItem(),
+ unitOfAlignment.getText(), parentOfUnitOfAlignment.getText(),
+ (String)dataSources.getSelectedItem(),
+ (String)storeAlignmentIn.getSelectedItem(),
+ (String)viewsToSelectFrom.getSelectedItem(),
+ actionsConfFile == null ? null :
actionsConfFile.getAbsolutePath());
+ } finally {
// MainFrame.unlockGUI();
}
return alignmentTask;
- }
- else {
+ } else {
return null;
}
}
/**
- * This method invokes a dialog that asks for source and target
- * documents
+ * This method invokes a dialog that asks for source and target documents
*
* @return
*/
@@ -1212,19 +1197,18 @@
constraints.insets = new Insets(0, 0, 0, 10);
mainPanel.add(targetDocs, constraints);
- int returnValue = JOptionPane.showOptionDialog(editor.getContentPane(),
- mainPanel, "Select Source and Target Documents",
- JOptionPane.PLAIN_MESSAGE, JOptionPane.OK_CANCEL_OPTION, MainFrame
- .getIcon("annotation-diff"), new String[] {"OK", "Cancel"},
- "OK");
+ int returnValue =
+ JOptionPane.showOptionDialog(editor.getContentPane(), mainPanel,
+ "Select Source and Target Documents", JOptionPane.PLAIN_MESSAGE,
+ JOptionPane.OK_CANCEL_OPTION, MainFrame.getIcon("annotation-diff"),
+ new String[]{"OK", "Cancel"}, "OK");
if(returnValue == JOptionPane.OK_OPTION) {
- Document srcDoc = document.getDocument((String)sourceDocs
- .getSelectedItem());
- Document tgtDoc = document.getDocument((String)targetDocs
- .getSelectedItem());
- return new Document[] {srcDoc, tgtDoc};
- }
- else {
+ Document srcDoc =
+ document.getDocument((String)sourceDocs.getSelectedItem());
+ Document tgtDoc =
+ document.getDocument((String)targetDocs.getSelectedItem());
+ return new Document[]{srcDoc, tgtDoc};
+ } else {
return null;
}
}
@@ -1238,7 +1222,7 @@
JTextArea container;
public HighlightAlignedAnnotation(Annotation a, Alignment alignment,
- JTextArea container) {
+ JTextArea container) {
super(a.getType());
this.a = a;
this.alignment = alignment;
@@ -1273,12 +1257,12 @@
for(Annotation a : srcAlignedAnnots) {
srcSelectedHighlights.add(addHighlight(a, sourceEditor,
- SELECTED_HIGHLIGHT));
+ SELECTED_HIGHLIGHT));
}
for(Annotation a : tgtAlignedAnnots) {
tgtSelectedHighlights.add(addHighlight(a, targetEditor,
- SELECTED_HIGHLIGHT));
+ SELECTED_HIGHLIGHT));
}
}
}
@@ -1290,15 +1274,14 @@
JPopupMenu popup = new JPopupMenu();
// check for annotations at location
- JTextArea editorToUse = editorPane == sourceEditor
- ? sourceEditor
- : targetEditor;
+ JTextArea editorToUse =
+ editorPane == sourceEditor ? sourceEditor : targetEditor;
AnnotationSet setToUse = editorPane == sourceEditor ? srcAS : tgtAS;
Document docToUse = editorPane == sourceEditor ? srcDoc : tgtDoc;
HighlightAlignedAnnotation haa = null;
- for(Annotation a : setToUse.get(Math.max(0l, textLocation - 1), Math.min(
- docToUse.getContent().size() - 1, textLocation + 1))) {
+ for(Annotation a : setToUse.get(Math.max(0l, textLocation - 1),
+ Math.min(docToUse.getContent().size() - 1, textLocation + 1))) {
if(alignment.isAnnotationAligned(a)) {
haa = new HighlightAlignedAnnotation(a, alignment, editorPane);
@@ -1311,12 +1294,10 @@
if(popup.getComponentCount() > 1) {
rect = editorToUse.modelToView(textLocation);
popup.show(editorToUse, rect.x + 10, rect.y);
- }
- else if(popup.getComponentCount() == 1) {
+ } else if(popup.getComponentCount() == 1) {
haa.actionPerformed(null);
}
- }
- catch(BadLocationException e) {
+ } catch(BadLocationException e) {
e.printStackTrace();
}
}
@@ -1356,21 +1337,18 @@
if(alignmentTask.getAlignmentView().equals(LINKS_VIEW)) {
alignmentView = new LinksView(alignmentTask);
- }
- else if(alignmentTask.getAlignmentView().equals(MATRIX_VIEW)) {
+ } else if(alignmentTask.getAlignmentView().equals(MATRIX_VIEW)) {
alignmentView = new MatrixView(alignmentTask);
- }
- else if(alignmentTask.getAlignmentView().endsWith(PARALLEL_VIEW)) {
+ } else if(alignmentTask.getAlignmentView().endsWith(PARALLEL_VIEW)) {
alignmentView = new ParallelTextView(alignmentTask);
- }
- else {
+ } else {
throw new GateRuntimeException("Invalid alignment view :"
- + alignmentTask.getAlignmentView());
+ + alignmentTask.getAlignmentView());
}
thisInstance.add((JPanel)alignmentView, BorderLayout.CENTER);
viewsToolbar.add(new JLabel("Selected View:"
- + alignmentTask.getAlignmentView()));
+ + alignmentTask.getAlignmentView()));
viewsToolbar.addSeparator();
viewsToolbar.add(new JLabel("Pair:"));
@@ -1403,16 +1381,16 @@
selectedFeature = (String)this.alignmentFeatures.getSelectedItem();
}
- List<String> alignmentFeatureNames = new ArrayList<String>(document
- .getAllAlignmentFeatureNames());
- final boolean reselect = selectedFeature != null ? alignmentFeatureNames
+ List<String> alignmentFeatureNames =
+ new ArrayList<String>(document.getAllAlignmentFeatureNames());
+ final boolean reselect =
+ selectedFeature != null ? alignmentFeatureNames
.contains(selectedFeature) : false;
- DefaultComboBoxModel model = new DefaultComboBoxModel(alignmentFeatureNames
- .toArray());
+ DefaultComboBoxModel model =
+ new DefaultComboBoxModel(alignmentFeatureNames.toArray());
if(this.alignmentFeatures == null) {
this.alignmentFeatures = new JComboBox(model);
- }
- else {
+ } else {
this.alignmentFeatures.setModel(model);
}
@@ -1425,8 +1403,7 @@
if(reselect) {
alignmentFeatures.setSelectedItem(featureToReselect);
refreshHighlightsAction();
- }
- else {
+ } else {
// delete any highlights
sourceEditor.getHighlighter().removeAllHighlights();
targetEditor.getHighlighter().removeAllHighlights();
@@ -1436,19 +1413,17 @@
}
/**
- * update the src or target annotation sets when there's any new
- * annotation set added
+ * update the src or target annotation sets when there's any new annotation
+ * set added
*/
public void annotationSetAdded(DocumentEvent e) {
Document doc = (Document)e.getSource();
JComboBox comboBox = null;
if(srcDoc == doc) {
comboBox = this.srcAnnotationSets;
- }
- else if(tgtDoc == doc) {
+ } else if(tgtDoc == doc) {
comboBox = this.tgtAnnotationSets;
- }
- else {
+ } else {
return;
}
@@ -1476,8 +1451,7 @@
if(ASToReselect != null) {
finalComboBox.setSelectedItem(ASToReselect);
refreshHighlightsAction();
- }
- else {
+ } else {
// delete any highlights
sourceEditor.getHighlighter().removeAllHighlights();
targetEditor.getHighlighter().removeAllHighlights();
@@ -1487,19 +1461,17 @@
}
/**
- * update the src or target annotation set combobox when an annotation
- * set is deleted.
+ * update the src or target annotation set combobox when an annotation set is
+ * deleted.
*/
public void annotationSetRemoved(DocumentEvent e) {
Document doc = (Document)e.getSource();
JComboBox comboBox = null;
if(srcDoc == doc) {
comboBox = this.srcAnnotationSets;
- }
- else if(tgtDoc == doc) {
+ } else if(tgtDoc == doc) {
comboBox = this.tgtAnnotationSets;
- }
- else {
+ } else {
return;
}
@@ -1516,9 +1488,8 @@
DefaultComboBoxModel model = (DefaultComboBoxModel)comboBox.getModel();
model.removeElement(deletedASName);
- final String ASToReselect = selectedASName.equals(deletedASName)
- ? null
- : deletedASName;
+ final String ASToReselect =
+ selectedASName.equals(deletedASName) ? null : deletedASName;
final JComboBox finalComboBox = comboBox;
// update ui
@@ -1529,8 +1500,7 @@
if(ASToReselect != null) {
finalComboBox.setSelectedItem(ASToReselect);
refreshHighlightsAction();
- }
- else {
+ } else {
// delete any highlights
sourceEditor.getHighlighter().removeAllHighlights();
targetEditor.getHighlighter().removeAllHighlights();
Modified:
gate/trunk/plugins/Alignment/src/gate/compound/gui/CompoundDocumentEditor.java
===================================================================
---
gate/trunk/plugins/Alignment/src/gate/compound/gui/CompoundDocumentEditor.java
2011-11-26 02:17:45 UTC (rev 14612)
+++
gate/trunk/plugins/Alignment/src/gate/compound/gui/CompoundDocumentEditor.java
2011-11-26 23:38:08 UTC (rev 14613)
@@ -429,6 +429,8 @@
}
public void cleanup() {
+ super.cleanup();
+
// close all open alignment editors
for(AlignmentEditor editor : alignmentEditors) {
// dispose will clean up the editor internally
@@ -441,7 +443,6 @@
tabbedPane.remove(h.getLargeView());
h.cleanup();
}
- super.cleanup();
+
}
-
}
Modified:
gate/trunk/plugins/Alignment/src/gate/compound/impl/AbstractCompoundDocument.java
===================================================================
---
gate/trunk/plugins/Alignment/src/gate/compound/impl/AbstractCompoundDocument.java
2011-11-26 02:17:45 UTC (rev 14612)
+++
gate/trunk/plugins/Alignment/src/gate/compound/impl/AbstractCompoundDocument.java
2011-11-26 23:38:08 UTC (rev 14613)
@@ -8,16 +8,15 @@
import gate.FeatureMap;
import gate.Gate;
import gate.Resource;
-import gate.annotation.AnnotationSetImpl;
import gate.compound.CompoundDocument;
import gate.corpora.DocumentContentImpl;
import gate.corpora.DocumentImpl;
import gate.event.CreoleEvent;
import gate.event.DatastoreEvent;
import gate.event.DocumentListener;
+import gate.util.GateRuntimeException;
import gate.util.InvalidOffsetException;
import gate.util.Strings;
-import gate.util.GateRuntimeException;
import java.io.IOException;
import java.io.ObjectInputStream;
@@ -26,7 +25,6 @@
import java.net.URL;
import java.util.ArrayList;
import java.util.HashMap;
-import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.Map;
@@ -34,9 +32,9 @@
import java.util.Vector;
/**
- * This is an abstract implementation of the AbstractAlignedDocument
- * This class overrides the methods of DocumentImpl and provide generic
- * implementation of some of the methods of AlignedDocument
+ * This is an abstract implementation of the AbstractAlignedDocument This class
+ * overrides the methods of DocumentImpl and provide generic implementation of
+ * some of the methods of AlignedDocument
*
* @author niraj
*/
@@ -47,16 +45,15 @@
protected String encoding = null;
/**
- * If you set this flag to true the repositioning information for the
- * document will be kept in the document feature. <br>
- * Default value is false to avoid the unnecessary waste of time and
- * memory
+ * If you set this flag to true the repositioning information for the
document
+ * will be kept in the document feature. <br>
+ * Default value is false to avoid the unnecessary waste of time and memory
*/
protected Boolean collectRepositioningInfo = new Boolean(false);
/**
- * If you set this flag to true the original content of the document
- * will be kept in the document feature. <br>
+ * If you set this flag to true the original content of the document will be
+ * kept in the document feature. <br>
* Default value is false to avoid the unnecessary waste of memory
*/
protected Boolean preserveOriginalContent = new Boolean(false);
@@ -88,14 +85,14 @@
private transient Vector<DocumentListener> documentListeners;
/**
- * The start of the range that the content comes from at the source
- * URL (or null if none).
+ * The start of the range that the content comes from at the source URL (or
+ * null if none).
*/
protected Long sourceUrlStartOffset;
/**
- * The end of the range that the content comes from at the source URL
- * (or null if none).
+ * The end of the range that the content comes from at the source URL (or
null
+ * if none).
*/
protected Long sourceUrlEndOffset;
@@ -103,12 +100,12 @@
protected Boolean markupAware = new Boolean(false);
/** exception message when the current document is not set */
- protected String CURR_DOC_NOT_SET_MSG = "Please use " +
- "setCurrentDocument(...) " +
- " method first.";
+ protected String CURR_DOC_NOT_SET_MSG = "Please use "
+ + "setCurrentDocument(...) method first!";
/** Clear all the data members of the object. */
public void cleanup() {
+ setCurrentDocument(null);
Iterator<Document> iter = documents.values().iterator();
while(iter.hasNext()) {
Document doc = iter.next();
@@ -121,28 +118,21 @@
} // cleanup()
/**
- * This method always returns features of the compound document. If
- * you want access to features of the member document - you can use
+ * This method always returns features of the compound document. If you want
+ * access to features of the member document - you can use
* getDocument(documentId).getFeatures()
- * */
+ */
@Override
public FeatureMap getFeatures() {
- if(currentDocument == null) {
- if(this.features == null) {
- this.features = Factory.newFeatureMap();
- }
- return this.features;
- } else {
- return currentDocument.getFeatures();
+ if(this.features == null) {
+ this.features = Factory.newFeatureMap();
}
+ return this.features;
}
-
/** gets the name of the current document */
public String getName() {
- if(currentDocument == null) {
- return super.getName();
- }
+ if(currentDocument == null) { return super.getName(); }
return currentDocument.getName();
}
@@ -154,12 +144,10 @@
currentDocument.setName(name);
}
}
-
+
/** Documents are identified by URLs */
public URL getSourceUrl() {
- if(currentDocument == null) {
- return sourceUrl;
- }
+ if(currentDocument == null) { return sourceUrl; }
return currentDocument.getSourceUrl();
}
@@ -167,33 +155,30 @@
public void setSourceUrl(URL sourceUrl) {
if(currentDocument == null) {
this.sourceUrl = sourceUrl;
- }
- else {
+ } else {
currentDocument.setSourceUrl(sourceUrl);
}
} // setSourceUrl
/**
- * Documents may be packed within files; in this case an optional pair
- * of offsets refer to the location of the document.
+ * Documents may be packed within files; in this case an optional pair of
+ * offsets refer to the location of the document.
*/
public Long[] getSourceUrlOffsets() {
- if(currentDocument == null) {
- return new Long[] {sourceUrlStartOffset, sourceUrlEndOffset};
- }
+ if(currentDocument == null) { return new Long[]{sourceUrlStartOffset,
+ sourceUrlEndOffset}; }
return currentDocument.getSourceUrlOffsets();
} // getSourceUrlOffsets
/**
* Allow/disallow preserving of the original document content. If is
- * <B>true</B> the original content will be retrieved from the
- * DocumentContent object and preserved as document feature.
+ * <B>true</B> the original content will be retrieved from the
DocumentContent
+ * object and preserved as document feature.
*/
public void setPreserveOriginalContent(Boolean b) {
if(currentDocument == null) {
this.preserveOriginalContent = b;
- }
- else {
+ } else {
currentDocument.setPreserveOriginalContent(b);
}
} // setPreserveOriginalContent
@@ -206,16 +191,14 @@
public Boolean getPreserveOriginalContent() {
if(currentDocument == null) {
return preserveOriginalContent;
- }
- else {
+ } else {
return currentDocument.getPreserveOriginalContent();
}
} // getPreserveOriginalContent
/**
- * Allow/disallow collecting of repositioning information. If is
- * <B>true</B> information will be retrieved and preserved as document
- * feature.<BR>
+ * Allow/disallow collecting of repositioning information. If is <B>true</B>
+ * information will be retrieved and preserved as document feature.<BR>
* Preserving of repositioning information give the possibilities for
* converting of coordinates between the original document content and
* extracted from the document text.
@@ -223,97 +206,88 @@
public void setCollectRepositioningInfo(Boolean b) {
if(currentDocument == null) {
collectRepositioningInfo = b;
- }
- else {
+ } else {
currentDocument.setCollectRepositioningInfo(b);
}
} // setCollectRepositioningInfo
/**
- * Get the collectiong and preserving of repositioning information for
- * the Document. <BR>
+ * Get the collectiong and preserving of repositioning information for the
+ * Document. <BR>
* Preserving of repositioning information give the possibilities for
* converting of coordinates between the original document content and
* extracted from the document text.
*
- * @return whether the Document should collect and preserve
- * information.
+ * @return whether the Document should collect and preserve information.
*/
public Boolean getCollectRepositioningInfo() {
if(currentDocument == null) {
return collectRepositioningInfo;
- }
- else {
+ } else {
return currentDocument.getCollectRepositioningInfo();
}
} // getCollectRepositioningInfo
/**
- * Documents may be packed within files; in this case an optional pair
- * of offsets refer to the location of the document. This method gets
- * the start offset.
+ * Documents may be packed within files; in this case an optional pair of
+ * offsets refer to the location of the document. This method gets the start
+ * offset.
*/
public Long getSourceUrlStartOffset() {
if(currentDocument == null) {
return sourceUrlStartOffset;
- }
- else {
+ } else {
return currentDocument.getSourceUrlStartOffset();
}
}
/**
- * Documents may be packed within files; in this case an optional pair
- * of offsets refer to the location of the document. This method sets
- * the start offset.
+ * Documents may be packed within files; in this case an optional pair of
+ * offsets refer to the location of the document. This method sets the start
+ * offset.
*/
public void setSourceUrlStartOffset(Long sourceUrlStartOffset) {
if(currentDocument == null) {
this.sourceUrlStartOffset = sourceUrlStartOffset;
- }
- else {
+ } else {
currentDocument.setSourceUrlStartOffset(sourceUrlStartOffset);
}
} // setSourceUrlStartOffset
/**
- * Documents may be packed within files; in this case an optional pair
- * of offsets refer to the location of the document. This method gets
- * the end offset.
+ * Documents may be packed within files; in this case an optional pair of
+ * offsets refer to the location of the document. This method gets the end
+ * offset.
*/
public Long getSourceUrlEndOffset() {
if(currentDocument == null) {
return sourceUrlEndOffset;
- }
- else {
+ } else {
return currentDocument.getSourceUrlEndOffset();
}
}
/**
- * Documents may be packed within files; in this case an optional pair
- * of offsets refer to the location of the document. This method sets
- * the end offset.
+ * Documents may be packed within files; in this case an optional pair of
+ * offsets refer to the location of the document. This method sets the end
+ * offset.
*/
public void setSourceUrlEndOffset(Long sourceUrlEndOffset) {
if(currentDocument == null) {
this.sourceUrlEndOffset = sourceUrlEndOffset;
- }
- else {
+ } else {
currentDocument.setSourceUrlEndOffset(sourceUrlEndOffset);
}
} // setSourceUrlStartOffset
/**
- * The content of the document: a String for text; MPEG for video;
- * etc.
+ * The content of the document: a String for text; MPEG for video; etc.
*/
public DocumentContent getContent() {
if(currentDocument == null) {
- throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG);
- }
- else {
+ return new DocumentContentImpl("");
+ } else {
return currentDocument.getContent();
}
}
@@ -329,8 +303,7 @@
public String getEncoding() {
if(currentDocument == null) {
return this.encoding;
- }
- else {
+ } else {
return ((DocumentImpl)currentDocument).getEncoding();
}
}
@@ -339,53 +312,49 @@
public void setEncoding(String encoding) {
if(currentDocument == null) {
this.encoding = encoding;
- }
- else {
+ } else {
((DocumentImpl)currentDocument).setEncoding(encoding);
}
}
/**
- * Get the default set of annotations. The set is created if it
- * doesn't exist yet.
+ * Get the default set of annotations. The set is created if it doesn't exist
+ * yet.
*/
public AnnotationSet getAnnotations() {
if(currentDocument == null) {
- throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG);
- }
- else {
+ throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG);
+ } else {
return currentDocument.getAnnotations();
}
} // getAnnotations()
/**
- * Get a named set of annotations. Creates a new set if one with this
- * name doesn't exist yet. If the provided name is null then it
- * returns the default annotation set.
+ * Get a named set of annotations. Creates a new set if one with this name
+ * doesn't exist yet. If the provided name is null then it returns the
default
+ * annotation set.
*/
public AnnotationSet getAnnotations(String name) {
if(currentDocument == null) {
throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG);
- }
- else {
+ } else {
return currentDocument.getAnnotations(name);
}
} // getAnnotations(name)
/**
* Make the document markup-aware. This will trigger the creation of a
- * DocumentFormat object at Document initialisation time; the
- * DocumentFormat object will unpack the markup in the Document and
- * add it as annotations. Documents are <B>not</B> markup-aware by
- * default.
+ * DocumentFormat object at Document initialisation time; the DocumentFormat
+ * object will unpack the markup in the Document and add it as annotations.
+ * Documents are <B>not</B> markup-aware by default.
*
- * @param newMarkupAware markup awareness status.
+ * @param newMarkupAware
+ * markup awareness status.
*/
public void setMarkupAware(Boolean newMarkupAware) {
if(currentDocument == null) {
this.markupAware = newMarkupAware;
- }
- else {
+ } else {
currentDocument.setMarkupAware(newMarkupAware);
}
}
@@ -399,69 +368,65 @@
public Boolean getMarkupAware() {
if(currentDocument == null) {
return this.markupAware;
- }
- else {
+ } else {
return currentDocument.getMarkupAware();
}
}
/**
* Returns an XML document aming to preserve the original markups( the
- * original markup will be in the same place and format as it was
- * before processing the document) and include (if possible) the
- * annotations specified in the aSourceAnnotationSet. It is equivalent
- * to toXml(aSourceAnnotationSet, true).
+ * original markup will be in the same place and format as it was before
+ * processing the document) and include (if possible) the annotations
+ * specified in the aSourceAnnotationSet. It is equivalent to
+ * toXml(aSourceAnnotationSet, true).
*/
public String toXml(Set aSourceAnnotationSet) {
if(currentDocument == null) {
- throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG +
- " OR call toXmlAsSingleDocument(...)");
- }
- else {
+ throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG);
+ } else {
return currentDocument.toXml(aSourceAnnotationSet);
}
}
/**
* Returns an XML document aming to preserve the original markups( the
- * original markup will be in the same place and format as it was
- * before processing the document) and include (if possible) the
- * annotations specified in the aSourceAnnotationSet. <b>Warning:</b>
- * Annotations from the aSourceAnnotationSet will be lost if they will
- * cause a crosed over situation.
+ * original markup will be in the same place and format as it was before
+ * processing the document) and include (if possible) the annotations
+ * specified in the aSourceAnnotationSet. <b>Warning:</b> Annotations from
the
+ * aSourceAnnotationSet will be lost if they will cause a crosed over
+ * situation.
*
- * @param aSourceAnnotationSet is an annotation set containing all the
- * annotations that will be combined with the original marup
- * set. If the param is <code>null</code> it will only dump
- * the original markups.
- * @param includeFeatures is a boolean that controls whether the
- * annotation features should be included or not. If false,
- * only the annotation type is included in the tag.
- * @return a string representing an XML document containing the
- * original markup + dumped annotations form the
- * aSourceAnnotationSet
+ * @param aSourceAnnotationSet
+ * is an annotation set containing all the annotations that will be
+ * combined with the original marup set. If the param is
+ * <code>null</code> it will only dump the original markups.
+ * @param includeFeatures
+ * is a boolean that controls whether the annotation features should
+ * be included or not. If false, only the annotation type is
included
+ * in the tag.
+ * @return a string representing an XML document containing the original
+ * markup + dumped annotations form the aSourceAnnotationSet
*/
public String toXml(Set aSourceAnnotationSet, boolean includeFeatures) {
if(currentDocument == null) {
throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG);
- }
- else {
+ } else {
return currentDocument.toXml(aSourceAnnotationSet, includeFeatures);
}
}// End toXml()
/**
- * Returns a GateXml document that is a custom XML format for wich
- * there is a reader inside GATE called gate.xml.GateFormatXmlHandler.
- * What it does is to serialize a GATE document in an XML format.
+ * Returns a GateXml document that is a custom XML format for wich there is a
+ * reader inside GATE called gate.xml.GateFormatXmlHandler. What it does is
to
+ * serialize a GATE document in an XML format.
*
* @return a string representing a Gate Xml document.
*/
public String toXml() {
if(currentDocument == null) {
+
return toXmlAsASingleDocument(this);
- }
- else {
+ } else {
return currentDocument.toXml();
}
}// toXml
@@ -484,38 +449,44 @@
globalMap.put("docXmls", docXmls);
// we would use XStream library to store annic patterns
- com.thoughtworks.xstream.XStream xstream = new
com.thoughtworks.xstream.XStream();
+ com.thoughtworks.xstream.XStream xstream =
+ new com.thoughtworks.xstream.XStream();
// Saving is accomplished just using XML serialization of the map.
StringWriter stringToReturn = new StringWriter();
+ Document currentDoc = aCompoundDoc.getCurrentDocument();
+ aCompoundDoc.setCurrentDocument(null);
+
// other features
Map<String, Object> features = new HashMap<String, Object>();
features.put("encoding", aCompoundDoc.getEncoding());
- features.put("collectRepositioningInfo", aCompoundDoc
- .getCollectRepositioningInfo());
- features.put("preserveOriginalContent", aCompoundDoc
- .getPreserveOriginalContent());
+ features.put("collectRepositioningInfo",
+ aCompoundDoc.getCollectRepositioningInfo());
+ features.put("preserveOriginalContent",
+ aCompoundDoc.getPreserveOriginalContent());
features.put("documentIDs", aCompoundDoc.getDocumentIDs());
features.put("markupAware", new Boolean(true));
features.put("name", aCompoundDoc.getName());
globalMap.put("feats", features);
-
globalMap.put("docFeats", aCompoundDoc.getFeatures());
+ // restore the original settings
+ aCompoundDoc.setCurrentDocument(currentDoc == null ? null : currentDoc
+ .getName());
+
xstream.toXML(globalMap, stringToReturn);
return stringToReturn.toString();
}
/**
- * Returns a map with the named annotation sets. It returns
- * <code>null</code> if no named annotaton set exists.
+ * Returns a map with the named annotation sets. It returns <code>null</code>
+ * if no named annotaton set exists.
*/
public Map<String, AnnotationSet> getNamedAnnotationSets() {
if(currentDocument == null) {
throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG);
- }
- else {
+ } else {
return currentDocument.getNamedAnnotationSets();
}
} // getNamedAnnotationSets
@@ -523,17 +494,17 @@
public Set<String> getAnnotationSetNames() {
if(currentDocument == null) {
throw new GateRuntimeException(CURR_DOC_NOT_SET_MSG);
- }
- else {
+ } else {
return currentDocument.getAnnotationSetNames();
}
}
/**
- * Removes one of the named annotation sets. Note that the default
- * annotation set cannot be removed.
+ * Removes one of the named annotation sets. Note that the default annotation
+ * set cannot be removed.
*
- * @param name the name of the annotation set to be removed
+ * @param name
+ * the name of the annotation set to be removed
*/
public void removeAnnotationSet(String name) {
if(currentDocument != null) {
@@ -543,7 +514,7 @@
/** Propagate edit changes to the document content and annotations. */
public void edit(Long start, Long end, DocumentContent replacement)
- throws InvalidOffsetException {
+ throws InvalidOffsetException {
if(currentDocument != null) {
currentDocument.edit(start, end, replacement);
}
@@ -566,8 +537,7 @@
s.append(" sourceUrl:" + sourceUrl + n);
s.append(n);
return s.toString();
- }
- else {
+ } else {
return currentDocument.toString();
}
} // toString
@@ -581,8 +551,7 @@
public synchronized void removeDocumentListener(DocumentListener l) {
if(currentDocument != null) {
currentDocument.removeDocumentListener(l);
- }
- else {
+ } else {
if(documentListeners != null && documentListeners.contains(l)) {
Vector v = (Vector)documentListeners.clone();
v.removeElement(l);
@@ -594,9 +563,9 @@
public synchronized void addDocumentListener(DocumentListener l) {
if(currentDocument != null) {
currentDocument.addDocumentListener(l);
- }
- else {
- Vector v = documentListeners == null
+ } else {
+ Vector v =
+ documentListeners == null
? new Vector<DocumentListener>(2)
: (Vector)documentListeners.clone();
if(!v.contains(l)) {
@@ -665,7 +634,7 @@
}
public void setDataStore(DataStore dataStore)
- throws gate.persist.PersistenceException {
+ throws gate.persist.PersistenceException {
super.setDataStore(dataStore);
if(this.dataStore != null) this.dataStore.addDatastoreListener(this);
}
@@ -678,8 +647,7 @@
Object obj = documents.get(documentID);
if(obj == null) {
return this;
- }
- else {
+ } else {
return (Document)obj;
}
}
@@ -693,8 +661,7 @@
Object obj = documents.get(documentID);
if(obj == null) {
currentDocument = null;
- }
- else {
+ } else {
currentDocument = (Document)obj;
}
}
@@ -711,8 +678,7 @@
if(docIDs != null) {
this.documentIDs = new ArrayList<String>();
this.documentIDs.addAll(docIDs);
- }
- else {
+ } else {
this.documentIDs = null;
}
}
@@ -722,7 +688,7 @@
* register when this compound is deserialized.
*/
private void readObject(ObjectInputStream stream) throws IOException,
- ClassNotFoundException {
+ ClassNotFoundException {
stream.defaultReadObject();
// register a validation callback to add our child documents
// to the creole register and fire the relevant events. This
@@ -732,9 +698,9 @@
public void validateObject() {
for(Document d : documents.values()) {
Gate.getCreoleRegister().get(d.getClass().getName())
- .addInstantiation(d);
+ .addInstantiation(d);
Gate.getCreoleRegister().resourceLoaded(
- new CreoleEvent(d, CreoleEvent.RESOURCE_LOADED));
+ new CreoleEvent(d, CreoleEvent.RESOURCE_LOADED));
}
}
}, 0);
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