Revision: 17440
          http://sourceforge.net/p/gate/code/17440
Author:   adamfunk
Date:     2014-02-26 15:39:05 +0000 (Wed, 26 Feb 2014)
Log Message:
-----------
Adding just a tad more of as much as I can without breaking existing
code...

Also, removing some cruft (old RDF generation utility functions &
other mysteries) and making the beloved SliderPanel take the general
Number for specifying min and max values.

Modified Paths:
--------------
    gate/trunk/plugins/TermRaider/src/gate/termraider/gui/SliderPanel.java
    gate/trunk/plugins/TermRaider/src/gate/termraider/util/AbstractBank.java
    gate/trunk/plugins/TermRaider/src/gate/termraider/util/ScoreType.java
    gate/trunk/plugins/TermRaider/src/gate/termraider/util/Utilities.java

Modified: gate/trunk/plugins/TermRaider/src/gate/termraider/gui/SliderPanel.java
===================================================================
--- gate/trunk/plugins/TermRaider/src/gate/termraider/gui/SliderPanel.java      
2014-02-26 15:38:00 UTC (rev 17439)
+++ gate/trunk/plugins/TermRaider/src/gate/termraider/gui/SliderPanel.java      
2014-02-26 15:39:05 UTC (rev 17440)
@@ -26,32 +26,41 @@
   private AbstractBank scoredbank;
   private JSlider slider;
   
-  
-  
-  // TODO
-  // Add another constructor for DocumentFrequencyBank, with more
-  // suitable slider range calculations
   public SliderPanel(AbstractBank scoredbank, String verb, boolean startLeft,
           TermbankViewer viewer) {
     this.scoredbank = scoredbank;
     this.setLayout(new FlowLayout());
-    
     JLabel typeLabel = new JLabel("Score cut-off");
-    double min = Math.floor(this.scoredbank.getMinScore());
-    double max = Math.ceil(this.scoredbank.getMaxScore());
+
+    int imin, imax, middle;
+    Number minScore = this.scoredbank.getMinScore();
     
-    if (max - min < 1.0) {
-      max = max + 1.0;
-      min = min - 1.0;
+    // This one is for DocumentFrequencyBank, which has int quasi-scores
+    if (minScore instanceof Integer) {
+      imin = minScore.intValue();
+      imax = this.scoredbank.getMaxScore().intValue();
+      middle = (int) ( (imin + imax) / 2);
     }
-    else if (max - min < 2.0) {
-      min = min - 1.0;
+
+    // This is for everything else
+    else {
+      double min = Math.floor(minScore.doubleValue());
+      double max = Math.ceil(this.scoredbank.getMaxScore().doubleValue());
+      
+      if (max - min < 1.0) {
+        max = max + 1.0;
+        min = min - 1.0;
+      }
+      else if (max - min < 2.0) {
+        min = min - 1.0;
+      }
+      
+      imin = (int) min;
+      imax = (int) max - 1;
+      middle = (int) Math.floor((min + max) / 2);
     }
     
-    int imin = (int) min;
-    int imax = (int) max - 1;
     
-    int middle = (int) Math.floor((min + max) / 2);
     slider = new JSlider(imin, imax);
     slider.setToolTipText("minimum value to " + verb);
     slider.setPaintTicks(false);

Modified: 
gate/trunk/plugins/TermRaider/src/gate/termraider/util/AbstractBank.java
===================================================================
--- gate/trunk/plugins/TermRaider/src/gate/termraider/util/AbstractBank.java    
2014-02-26 15:38:00 UTC (rev 17439)
+++ gate/trunk/plugins/TermRaider/src/gate/termraider/util/AbstractBank.java    
2014-02-26 15:39:05 UTC (rev 17440)
@@ -17,7 +17,6 @@
 import gate.creole.metadata.CreoleParameter;
 import gate.util.GateException;
 import java.io.File;
-import org.apache.commons.lang.StringUtils;
 import java.util.*;
 
 
@@ -31,9 +30,9 @@
 
   protected Set<String> languages, types;
   
-  public abstract Double getMinScore();
+  public abstract Number getMinScore();
   
-  public abstract Double getMaxScore();
+  public abstract Number getMaxScore();
   
   public abstract void saveAsCsv(double threshold, File file)
     throws GateException;
@@ -48,21 +47,7 @@
   public Set<String> getTypes() {
     return this.types;
   }
-
   
-  public String shortScoreDescription() {
-    String result = "";
-    if (this.scoreProperty != null) {
-      result = this.scoreProperty;
-      if (result.endsWith("Score")) {
-        result = StringUtils.substring(result, 0, -5);
-      }
-    }
-    return result;
-  }
-  
-  
-  
   public Term makeTerm(Annotation annotation, Document document) {
     return new Term(annotation, document, 
             this.languageFeature, this.inputAnnotationFeature);
@@ -139,6 +124,5 @@
   public String getInputASName() {
     return this.inputASName;
   }
-
   
 }

Modified: gate/trunk/plugins/TermRaider/src/gate/termraider/util/ScoreType.java
===================================================================
--- gate/trunk/plugins/TermRaider/src/gate/termraider/util/ScoreType.java       
2014-02-26 15:38:00 UTC (rev 17439)
+++ gate/trunk/plugins/TermRaider/src/gate/termraider/util/ScoreType.java       
2014-02-26 15:39:05 UTC (rev 17440)
@@ -11,8 +11,6 @@
  */
 package gate.termraider.util;
 
-import org.apache.commons.lang.StringUtils;
-import org.apache.commons.lang.WordUtils;
 
 public class ScoreType implements Comparable<ScoreType> {
 
@@ -37,7 +35,7 @@
     this.string = string;
     
     // Normalize = remove leading & trailing whitespace then camelCase
-    this.normalizedString = 
WordUtils.capitalize(StringUtils.trimToEmpty(string)).replaceAll("\\s+", "");
+    this.normalizedString = Utilities.cleanAndCamelCase(string);
     
     if (this.normalizedString.length() == 0) {
       throw new IllegalArgumentException("ScoreType must contain some 
non-whitespace characters.");

Modified: gate/trunk/plugins/TermRaider/src/gate/termraider/util/Utilities.java
===================================================================
--- gate/trunk/plugins/TermRaider/src/gate/termraider/util/Utilities.java       
2014-02-26 15:38:00 UTC (rev 17439)
+++ gate/trunk/plugins/TermRaider/src/gate/termraider/util/Utilities.java       
2014-02-26 15:39:05 UTC (rev 17440)
@@ -1,5 +1,5 @@
 /*
- *  Copyright (c) 2008--2013, The University of Sheffield. See the file
+ *  Copyright (c) 2008--2014, The University of Sheffield. See the file
  *  COPYRIGHT.txt in the software or at http://gate.ac.uk/gate/COPYRIGHT.txt
  *
  *  This file is part of GATE (see http://gate.ac.uk/), and is free
@@ -16,7 +16,8 @@
 import java.io.*;
 import java.net.*;
 import java.util.*;
-import gate.termraider.bank.*;
+import org.apache.commons.lang.StringUtils;
+import org.apache.commons.lang.WordUtils;
 
 
 public class Utilities implements ANNIEConstants {
@@ -47,13 +48,11 @@
    * The following produces the right half of a sigmoid 
    * curve adjusted so that
    * f(0) = 0; f(inf) = 100; f(x>0) > 0
-   * @param score
-   * @return
+   * @param score from 0 to inf 
+   * @return score from 0 to 100
    */
   public static double normalizeScore(double score) {
     double norm = 2.0 / (1.0 + Math.exp(-score / xScale)) - 1.0;
-    // The old normalization function was undocumented
-    //double norm = 1.0 - 1.0 / (1.0 + Math.log10(1.0 + score));
     return (double) (100.0F * norm);
   }
 
@@ -67,50 +66,15 @@
     return Double.parseDouble(x.toString()) ;
   }
 
-  
-  /**
-   * Suitable for embedding in URIs.
-   */
-  public static String veryCleanString(String input) {
-    String clean = input.trim();
-    return clean.replaceAll("[^\\p{Alnum}\\p{Lu}\\p{Ll}]+", "_");
-  }
 
-  
-  
-  public static String generateID(String prefix, String suffix) {
-    return prefix + java.util.UUID.randomUUID().toString() + suffix;
+  public static String cleanAndCamelCase(String input) {
+    // remove leading & trailing whitespace then camelCase
+    return 
WordUtils.capitalize(StringUtils.trimToEmpty(input)).replaceAll("\\s+", "");
   }
-
   
-  public static URL getUrlInJar(AbstractTermbank termbank, String filename) {
-    ClassLoader cl = termbank.getClass().getClassLoader();
-    return cl.getResource(filename);
-  }
-  
-  public static List<String> keysAsStrings(FeatureMap fm) {
-    List<String> result = new ArrayList<String>();
-    if (fm != null) {
-      Set<?> keys = fm.keySet();
-      for (Object key : keys) {
-        result.add(key.toString());
-      }
-    }
-    return result;
-  }
-
-
-  public static List<String> valuesAsStrings(FeatureMap fm) {
-    List<String> result = new ArrayList<String>();
-    if (fm != null) {
-      for (Object key : fm.keySet()) {
-        result.add(fm.get(key).toString());
-      }
-    }
-    return result;
-  }
-  
-  
+  /* The following methods are NOT cruft but are used in some JAPEs,
+   * so don't delete them.
+   */
   public static void setCanonicalFromLemma(Annotation token, Document doc, 
String lemmaFeatureName) {
     String canonical = getCanonicalFromLemma(token, doc, lemmaFeatureName);
     token.getFeatures().put("canonical", canonical);

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