Hi I want to add some biobench applications to Mybench.py. The command is:
../src/bin/TIGR_Assembler -n ../input/sitchensis.fa -g 8 -l 40 -e 15 -p 97.5 -a ../output/sitchensis.align -f ../input/sitchensis.fasta -s ../output/sitchensis.scratch < ../input/sitchensis.fa I created an entry like this: bio_dir = '/home/mahmood/biobench/' tiger_dir = bio_dir + '002.tiger/' tiger_bin = tiger_dir + 'src/bin/TIGR_Assembler' tiger_inp1 = tiger_dir + 'input/sitchensis.fa' tiger_inp2 = tiger_dir + 'input/sitchensis.fasta' tiger_out1 = tiger_dir + 'output/sitchensis.scratch' tiger_out2 = tiger_dir + 'output/sitchensis.align' tiger = LiveProcess() tiger.executable = tiger_bin tiger.cwd = tiger_dir tiger.cmd = [tiger.executable] + ['-n', tiger_inp1, '-g', '8', '-l', '40', '-e', '15', '-p', '97.5', '-a', tiger_out2, '-f', tiger_inp2, '-s', tiger_out1, tiger_inp1] Problem is when I use "-b tiger", the *usage* is shown. Seems that it doesn't recognize input and output files in tiger.cmd Appreciate any comment -- // Naderan *Mahmood; _______________________________________________ gem5-users mailing list gem5-users@gem5.org http://m5sim.org/cgi-bin/mailman/listinfo/gem5-users
