David, Thanks. Yea the modules are on a filesystem -- /opt/MarkLogic/AppServer/*.xqy
Ok I will talk to oxygen support team. But assuming Oxygen can debug only DB based modules as you hinted on, how would I create the DB based module or load the xquery modules to the database? Thanks Sent from my iPhone > On Apr 11, 2015, at 12:50 PM, general-requ...@developer.marklogic.com wrote: > > Send General mailing list submissions to > general@developer.marklogic.com > > To subscribe or unsubscribe via the World Wide Web, visit > http://developer.marklogic.com/mailman/listinfo/general > or, via email, send a message with subject or body 'help' to > general-requ...@developer.marklogic.com > > You can reach the person managing the list at > general-ow...@developer.marklogic.com > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of General digest..." > > > Today's Topics: > > 1. Re: Adding DOCTYPE header to xml documents in MarkLogic > (Mary Holstege) > 2. Re: DISK space error (Shashidhar Rao) > 3. Re: DISK space error (Indrajeet Verma) > 4. Error debugging HTTP app server through Oxygen (Ross A) > 5. Re: Error debugging HTTP app server through Oxygen (David Lee) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Fri, 10 Apr 2015 12:39:40 -0700 > From: Mary Holstege <mary.holst...@marklogic.com> > Subject: Re: [MarkLogic Dev General] Adding DOCTYPE header to xml > documents in MarkLogic > To: MarkLogic Developer Discussion <general@developer.marklogic.com> > Message-ID: <op.xwv58e06fi7...@mary-z620.marklogic.com> > Content-Type: text/plain; charset="utf-8"; format=flowed; delsp=yes > > On Fri, 10 Apr 2015 12:05:58 -0700, Danny Sinang <d.sin...@gmail.com> > wrote: > >> Hi Mary, >> >> I have to output the DOCTYPE below. >> >> <!DOCTYPE Acme.Journal SYSTEM "../../../png.dtd"[]> >> >> >> I'm thinking I can do this inside my query : >> >> declare option xdmp:output "doctype-system="../../../png.dtd"; >> >> >> But how will "Acme.Journal" and the trailing "[]" get included in the >> DOCTYPE tag ? >> >> Regards, >> Danny > > The Acme.Journal will happen automatically if the root of your document is > Acme.Journal. > > The [] is redundant and there is no way to force it. No XML tool should > require it. > > //Mary > >> >> >> On Wed, Feb 13, 2013 at 11:03 AM, Mary Holstege >> <mary.holst...@marklogic.com >>> wrote: >> >>> On Wed, 13 Feb 2013 07:36:26 -0800, Geert Josten <geert.jos...@dayon.nl> >>> wrote: >>> >>>> Hi Karthik, >>>> >>>> >>>> >>>> If you let MarkLogic parse such doctypes properly (using >>> document-load, >>>> document-get or unquote), you would see it gets stripped away. That is >>>> conform XML recommendation. The doctype would have no use inside >>>> MarkLogic, >>>> so I wouldn?t bother inserting it at storage within MarkLogic. >>> Instead, >>>> add >>>> the doctype on output. You can specify output options within a >>> specific >>>> XQuery file, or you can specify it in general for an App Server in the >>>> Admin interface. >>> >>> Just to expand a bit. The DOCTYPE header is not valid as a literal >>> in XQuery, so if you were trying to add it to your content via XQuery, >>> that is why you got the error. >>> >>> MarkLogic does not do DTD validation, so the presence or absence of >>> the header will not materially affect how the XML is processed. If you >>> want the header to appear when you output the content again, this >>> can be achieved through serialization parameters. You can configure >>> these for the appserver, or in your query header. >>> >>> e.g. >>> >>> declare option xdmp:output "doctype-public=-/NLM/DTD Test//En"; >>> declare option xdmp:output "doctype-system=Test.dtd"; >>> >>> //Mary >>> >>>> >>>> I have a requirement to add a DOCTYPE header to a xml document stored >>> in >>>> MarkLogic DB. >>>> >>>> <!DOCTYPE Test PUBLIC "-//NLM//DTD Test //EN" >>> "Test.dtd"> >>>> >>>> >>>> >>>> If I try to insert a document with the above DOCTYPE header, I am >>> getting >>>> ?Unexpected token syntax error, unexpected Junk_?. >>>> >>>> I didn?t face any issue when I try to insert documents with XSD >>> mapping. >>>> >>>> Is it possible to insert documents with DOCTYPE header? >>> _______________________________________________ >>> General mailing list >>> General@developer.marklogic.com >>> http://developer.marklogic.com/mailman/listinfo/general > > > -- > Using Opera's revolutionary email client: http://www.opera.com/mail/ > > > ------------------------------ > > Message: 2 > Date: Sat, 11 Apr 2015 12:46:24 +0530 > From: Shashidhar Rao <raoshashidhar...@gmail.com> > Subject: Re: [MarkLogic Dev General] DISK space error > To: general@developer.marklogic.com > Message-ID: > <cafy8jifw4qe4gwtehi4bby5dput+pxd4cb6rr34-nuntfgo...@mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > Thanks to all experts who have given me suggestions really appreciate your > help and have learnt so many things. > > I created a symbolic link to /var/opt/MarkLogic /home/Marklogic(where > there is lots of space) and created 4 forest(This number I am not quite > sure its the correct number) but the loading is going on without any error. > By the way I am using mlcp to load. > > Thanks and thanks to everyone once again. > > On Sat, Apr 11, 2015 at 12:17 AM, Shashidhar Rao <raoshashidhar...@gmail.com >> wrote: > >> Thanks Geert , I don't have any issue going over the steps again. As I >> want to start all over again. >> >> On Fri, Apr 10, 2015 at 11:41 PM, Shashidhar Rao < >> raoshashidhar...@gmail.com> wrote: >> >>> Thanks for all your suggestions >>> Marklogic keeps all its data in /var/opt/Marklogic , so now I want to fix >>> this issue. Below are the steps I would like to follow . >>> >>> /home has the highest disk space which is 1.2 TB >>> So , I create a folder /home/opt/Marklogic >>> ln -s /var/opt/Marklogic /home/opt/Marklogic >>> >>> There a couple of files inside in /var/opt/Marklogic from the previous >>> database and forest creation such as forest , database and other xmls. >>> Should I delete all these files, >>> >>> Won't there be any problem if I create a new database. >>> >>> Thanks once again. >>> >>> On Fri, Apr 10, 2015 at 5:57 PM, Shashidhar Rao < >>> raoshashidhar...@gmail.com> wrote: >>> >>>> Hi Marklogic experts, >>>> >>>> We are running into space problem while trying to load data through mlcp >>>> >>>> 1. Total disk size 1.8 TB >>>> 2. Free space is 1.3 TB /home >>>> 3. we are loading 250 GB data. >>>> >>>> Error we are getting is below - >>>> >>>> SVC-FILWRT: File write error: write 'filename': No space left on device >>>> Error in merge of forest [Forest-Name]: XDMP-MERGESPACE: Not merging due >>>> to disk space limitations, need=584MB, have=260MB >>>> >>>> This I found somewhere-- >>>> Merges require at least twice as much free disk space as used by the >>>> forest data (3X rule). If a merge runs out of disk space, it will fail. >>>> >>>> We feel there is enough space as free space is 1.3 TB >>>> >>>> What configurations we can make in database merging page to avoid this >>>> error. >>>> >>>> Thanks > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > http://developer.marklogic.com/pipermail/general/attachments/20150411/3ede75d7/attachment-0001.html > > > ------------------------------ > > Message: 3 > Date: Sat, 11 Apr 2015 18:12:51 +0530 > From: Indrajeet Verma <indrajeet.ve...@gmail.com> > Subject: Re: [MarkLogic Dev General] DISK space error > To: MarkLogic Developer Discussion <general@developer.marklogic.com> > Message-ID: > <CAKwHAehVtVja7_Hca24vE18=1xiwxuhbia8xnbrsxpk36us...@mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > To know more about Forests and other performance improvements, you can > refer > https://developer.marklogic.com/pubs/architecture/inside-marklogic-server-r7.pdf > > On Sat, Apr 11, 2015 at 12:46 PM, Shashidhar Rao <raoshashidhar...@gmail.com >> wrote: > >> Thanks to all experts who have given me suggestions really appreciate your >> help and have learnt so many things. >> >> I created a symbolic link to /var/opt/MarkLogic /home/Marklogic(where >> there is lots of space) and created 4 forest(This number I am not quite >> sure its the correct number) but the loading is going on without any error. >> By the way I am using mlcp to load. >> >> Thanks and thanks to everyone once again. >> >> On Sat, Apr 11, 2015 at 12:17 AM, Shashidhar Rao < >> raoshashidhar...@gmail.com> wrote: >> >>> Thanks Geert , I don't have any issue going over the steps again. As I >>> want to start all over again. >>> >>> On Fri, Apr 10, 2015 at 11:41 PM, Shashidhar Rao < >>> raoshashidhar...@gmail.com> wrote: >>> >>>> Thanks for all your suggestions >>>> Marklogic keeps all its data in /var/opt/Marklogic , so now I want to >>>> fix this issue. Below are the steps I would like to follow . >>>> >>>> /home has the highest disk space which is 1.2 TB >>>> So , I create a folder /home/opt/Marklogic >>>> ln -s /var/opt/Marklogic /home/opt/Marklogic >>>> >>>> There a couple of files inside in /var/opt/Marklogic from the previous >>>> database and forest creation such as forest , database and other xmls. >>>> Should I delete all these files, >>>> >>>> Won't there be any problem if I create a new database. >>>> >>>> Thanks once again. >>>> >>>> On Fri, Apr 10, 2015 at 5:57 PM, Shashidhar Rao < >>>> raoshashidhar...@gmail.com> wrote: >>>> >>>>> Hi Marklogic experts, >>>>> >>>>> We are running into space problem while trying to load data through mlcp >>>>> >>>>> 1. Total disk size 1.8 TB >>>>> 2. Free space is 1.3 TB /home >>>>> 3. we are loading 250 GB data. >>>>> >>>>> Error we are getting is below - >>>>> >>>>> SVC-FILWRT: File write error: write 'filename': No space left on device >>>>> Error in merge of forest [Forest-Name]: XDMP-MERGESPACE: Not merging >>>>> due to disk space limitations, need=584MB, have=260MB >>>>> >>>>> This I found somewhere-- >>>>> Merges require at least twice as much free disk space as used by the >>>>> forest data (3X rule). If a merge runs out of disk space, it will fail. >>>>> >>>>> We feel there is enough space as free space is 1.3 TB >>>>> >>>>> What configurations we can make in database merging page to avoid this >>>>> error. >>>>> >>>>> Thanks >> >> _______________________________________________ >> General mailing list >> General@developer.marklogic.com >> Manage your subscription at: >> http://developer.marklogic.com/mailman/listinfo/general > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > http://developer.marklogic.com/pipermail/general/attachments/20150411/b3f4792b/attachment-0001.html > > > ------------------------------ > > Message: 4 > Date: Sat, 11 Apr 2015 11:50:59 -0400 > From: Ross A <a.ro...@gmail.com> > Subject: [MarkLogic Dev General] Error debugging HTTP app server > through Oxygen > To: general@developer.marklogic.com > Message-ID: > <CAA9kcfyRMt-GZUwaoEdLHek9kgjWUax9rtqxVjbOEKuoUGz=m...@mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > So I'm running couple of the MarkLogic getting started tutorials. I set up > my MarkLogic datasource/connection both in oxygen and eclipse. That part > looks great. > > The problem I'm having is, I can't seem to run the debugger. I keep getting > the following error below in both oxygen and eclipse: > > Description: > com.marklogic.xcc.exceptions.XQueryException.getStack()[Lcom/marklogic/xcc/exceptions/XQueryStackFrame; > > Severity: > Error > > System ID: > oxygen://user1@localhost/MarkLogic DS$MarkLogic > Connection/fs/AppServer/$AppServer/dump.xqy$/dump.xqy > > I'm I missing anything? > > Thx > Ross > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > http://developer.marklogic.com/pipermail/general/attachments/20150411/e9f2e46f/attachment-0001.html > > > ------------------------------ > > Message: 5 > Date: Sat, 11 Apr 2015 16:50:08 +0000 > From: David Lee <david....@marklogic.com> > Subject: Re: [MarkLogic Dev General] Error debugging HTTP app server > through Oxygen > To: MarkLogic Developer Discussion <general@developer.marklogic.com> > Message-ID: > <6ad72d76c2d6f04d8be471b70d4b991e0bc72...@exchg10-be01.marklogic.com> > Content-Type: text/plain; charset="utf-8" > > Is your module in the filesystem or the database ? > I recall that Oxygen could only debug one or the other, I think only DB based > modules ( seeing the error: > Connection/fs/AppServer/$AppServer/dump.xqy$/dump.xqy > The "fs" part is a clue. > > What version of MarkLogic are you running ? > You should also contact Oxygen support/help - ML is not directly involved in > Oxygen software support (we don't have their code and don't know exactly what > it does - but we are on good terms.) > They are very responsive and if you can isolate the problem they will help > you with it or fix it - or contact us if they think its a bug in the server. > > > > > ----------------------------------------------------------------------------- > David Lee > Lead Engineer > MarkLogic Corporation > d...@marklogic.com > Phone: +1 812-482-5224 > Cell: +1 812-630-7622 > www.marklogic.com<http://www.marklogic.com/> > > From: general-boun...@developer.marklogic.com > [mailto:general-boun...@developer.marklogic.com] On Behalf Of Ross A > Sent: Saturday, April 11, 2015 11:51 AM > To: general@developer.marklogic.com > Subject: [MarkLogic Dev General] Error debugging HTTP app server through > Oxygen > > So I'm running couple of the MarkLogic getting started tutorials. I set up my > MarkLogic datasource/connection both in oxygen and eclipse. That part looks > great. > > The problem I'm having is, I can't seem to run the debugger. I keep getting > the following error below in both oxygen and eclipse: > > Description: > com.marklogic.xcc.exceptions.XQueryException.getStack()[Lcom/marklogic/xcc/exceptions/XQueryStackFrame; > > Severity: > Error > > System ID: > oxygen://user1@localhost/MarkLogic DS$MarkLogic > Connection/fs/AppServer/$AppServer/dump.xqy$/dump.xqy > I'm I missing anything? > Thx > Ross > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: > http://developer.marklogic.com/pipermail/general/attachments/20150411/02fd4032/attachment.html > > > ------------------------------ > > _______________________________________________ > General mailing list > General@developer.marklogic.com > Manage your subscription at: > http://developer.marklogic.com/mailman/listinfo/general > > > End of General Digest, Vol 130, Issue 37 > **************************************** _______________________________________________ General mailing list General@developer.marklogic.com Manage your subscription at: http://developer.marklogic.com/mailman/listinfo/general
