Try specifying the database you want for example: mysql --user=genome --host=genome-mysql.cse.ucsc.edu -A hg18
Dont know what database you want though; hg19, mm9, etc M On Fri, Aug 28, 2009 at 7:19 AM, GEORGE LOCKE<[email protected]> wrote: > Hi, > > I'm a grad student at Rutgers trying to get access to data from the genome > browser mysql database. I'm doing research in nucleosome positioning with > Prof. Alex Morozov. > > i logged on as suggested, mysql --user=genome > --host=genome-mysql.cse.ucsc.edu -A > > this is the query I wish to execute: > select chrom, chromStart, chromEnd, score, strand from > nucleosomeFragmentsSense into outfile "dump.txt"; > (using database ce4) > > this is the error i get: ERROR 1045 (28000): Access denied for user > 'genome'@'%' (using password: NO) > > what can I do? I can't find this information in text format anywhere and > hoped I could just get it direct from the database but have been rebuffed. > > Regards, > George > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > -- Michael Pheasant Associate Project Scientist UCSC Genome Browser Email: [email protected] Skype: mpheasant Phone: +1-831-459-1424 Location: Engineering2 Room 515 Post: CBSE, UC Santa Cruz, MS:CBSE/ITI 1156 High Street Santa Cruz, CA 95064, USA _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
