ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/GENE_INFO/Mammalia/Rattus_norvegicus.gene_info.gz
Hopefully this helps! Wenwu Cui PhD Sr. Bioinformatics Scientist NEXTBIO > 3 Results Way Cupertino CA 95014 -----Original Message----- From: [email protected] [mailto:[email protected]] On Behalf Of Rangel, Zoila G (NIH/CIT) [C] Sent: Friday, October 02, 2009 9:16 AM To: [email protected] Subject: [Genome] Help with downloading data Dear Sirs, I have attempted to download data from the table browser page and have not been able to get all the fields I need. I am working in the Rat genome and am trying to acquire the refseq, organism, GeneSymbol, GeneID, gene description, chromosome,strand txStart, txEnd, exonStart, exonEnd, number of exons, cdsStart and cdsEnd for all the non Rat genes. I have been able to acquire all of the information except for the Gene description(or gene title) and the GeneID. I have been able to download xenoRefGene and info from some of its linking tables but have not been able to get the last two fields that I need. Can you give me any guidance in this area. I believe the problem is that I'm need data outside the rn4 database that I'm working in but that is just my guess. Thank you, Zoila ~~~~~~~~~~~~~<<<<<>>>>>~~~~~~~~~~~~~~~~ Zoila G. Rangel [email protected]<mailto:[email protected]> Contractor- SRA International, Inc. MSCL/DCB/CIT/NIH (Phone) 301-402-9712 Building 12A, Room 2001 Bethesda, MD 20892 ~~~~~~~~~~~~~<<<<<>>>>>~~~~~~~~~~~~~~~~ _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
