Hello Jennifer,

Thank you for that info. Do you have any suggestions on where to start. I
was going to see if there was any table with the list of hgsids but it turns
out those are just temp ids and not really useful.

Each time a BED file is loaded into the browser to create a custom track a
new table is added to the customTrash database. The table itself is just the
mysql version of the BED file.

Thanks.

Abhishek


Abhishek Goel
Staff Research Associate
Geschwind Laboratory, UCLA Neurology
Gonda Neuroscience and Genetics Research Center #2309
University of California Los Angeles
695 Charles E. Young Dr. South
Los Angeles, CA 90095
Tel: (310) 794-7537
Fax: (310) 267-2401





On Thu, Oct 22, 2009 at 5:42 PM, Jennifer Jackson <[email protected]> wrote:

> Hello,
>
> No, there is no automatically generated page. The idea of making one from
> the custom track table is a good one.
>
> The only alternative would be to get wiki and Sessions set up, but that is
> a major project, and not worth it for just a web page view.
>
> Hope this helps,
> Jennifer
>
>
> ------------------------------------------------
> Jennifer Jackson
> UCSC Genome Bioinformatics Group
>
> ----- "Abhishek Goel" <[email protected]> wrote:
>
> > From: "Abhishek Goel" <[email protected]>
> > To: [email protected]
> > Sent: Thursday, October 22, 2009 12:29:28 PM GMT -08:00 US/Canada Pacific
> > Subject: [Genome] Saved custom tracks
> >
> > Hello,
> >
> > I've just set up a Genome Browser mirror for our lab and our
> > collaborators.
> > I enabled the customTrash database and set up the hg.conf file so that
> > the
> > added customTracks are saved. However, is there a page that lists all
> > the
> > custom tracks that have been saved?
> >
> > I could just create a page that would list all the saved custom tracks
> > from
> > the mysql database but I thought if there is already a page I could
> > just use
> > that.
> >
> > Thanks.
> >
> > Abhishek
> >
> > Abhishek Goel
> > Staff Research Associate
> > Geschwind Laboratory, UCLA Neurology
> > Gonda Neuroscience and Genetics Research Center #2309
> > University of California Los Angeles
> > 695 Charles E. Young Dr. South
> > Los Angeles, CA 90095
> > Tel: (310) 794-7537
> > Fax: (310) 267-2401
> > _______________________________________________
> > Genome maillist  -  [email protected]
> > https://lists.soe.ucsc.edu/mailman/listinfo/genome
>
_______________________________________________
Genome maillist  -  [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome

Reply via email to