Hello, Your file is not in bedGraph format. http://genome.ucsc.edu/goldenPath/help/bedgraph.html
Double check the source data and pick the best custom track format to fit the data. http://genome.ucsc.edu/goldenPath/help/customTrack.html If you need help, send some of the raw data with column definitions, what you are trying to do/view, and we can offer advice. You can send the data directly to me (off the the mailing list) to keep it more private. Thanks Jen ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Abhishek Pratap" <[email protected]> wrote: > From: "Abhishek Pratap" <[email protected]> > To: [email protected] > Sent: Monday, November 30, 2009 3:18:07 PM GMT -08:00 US/Canada Pacific > Subject: [Genome] Error Loading custom track :BedGraph File > > Hi All > > > > After a quick look at the mailing list archive I am not able to > resolve > the following issue. > > > > I am trying to view a custom bedGraph file and getting the following > error. > > > > >>> Error File 'coverage.wig.bz2' - Unrecognized format type=bedGraph > line 2 of somefile.bz2 > > > > > > I am also copying few lines from the file. > > track type=bedGraph name="TopHat - read coverage" > > gi|17981852|ref|NC_001807.4| 0 0 0 > > gi|17981852|ref|NC_001807.4| 0 1 5 > > gi|17981852|ref|NC_001807.4| 1 2 17 > > gi|17981852|ref|NC_001807.4| 2 3 22 > > gi|17981852|ref|NC_001807.4| 3 5 58 > > > > > > Thanks, > > -Abhi > > > > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
