Hello, The UCSC Browser and the NCBI browser often present similar data, but they are developed and maintained by difference research projects. There will be data in common and data that is not in common and this is expected. The best approach is to use the most common identifiers when attempting to compare data between the two databases.
For this example, if I search in the mouse genome by the primary identifier, the est sequence accession AI854517, I am able to locate the sequence in the UCSC browser. http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=Retrieve&dopt=summary&list_uids=101694 Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Peng Yu" <[email protected]> wrote: > From: "Peng Yu" <[email protected]> > To: [email protected] > Sent: Wednesday, December 2, 2009 1:53:02 PM GMT -08:00 US/Canada Pacific > Subject: [Genome] Why GeneID 101694 can not be found in genome browser? > > GeneID 101694 can be found at > http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=Retrieve&dopt=summary&list_uids=101694 > > But I don't see it in genome browser. The error message is "Sorry, > couldn't locate 101694 in genome database". Could somebody let me > know > why there is such inconsistency? > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
