Dear UCSC list, I am trying to use my html webpage (sample text shown below) as the url parameter in track line
<A NAME="rs7591"></A> <H2>rs7591</H2> <P>This is a section that provides additional information about SNP rs7591. <BR> <BR>Item: rs7591 <BR>Chromosome: 17 <BR>Begin in Chromosome: 60955543 <BR>End in Chromosome: 60955543 <BR>Genomic Size: 1 <BR>Unadjusted P-value: 0.7352 <HR> My text file for creating custom track is: browser position chr17:60955144-61067645 track name="Custom_SNPs" description="SNPs on XXXXXX gene from GWAS study" visibility=1 color=255,0,0 db=hg18 group="varRep" url="file:///C:/Users/Lohith/Documents/Shared_Documents/doc.html#$$" chr17 60955543 60955543 rs7591 I want to display the SNP and pvalue associated with it as a custom track. I just have shown one SNP here. I am using a local file C:/Users/Lohith/Documents/Shared_Documents/doc.html#$$ (also tried file:///C:/Users/Lohith/Documents/Shared_Documents/doc.html#$$) to display the p-value and other info. I am not using any external html url. Will it not work with user made local html files? I get the following error using the above two files: Couldn't find rs7...@chr17:60955543 in ../trash/ct/ct_genome_5a1f_9941e0.bed Please let me know what's wrong with the input files that the genome browser cannot use my local html file when I click the snp in custom track... I appreciate your advise. Thanks in advance Lohith _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
