Hello Parveen, The tables kgAlias and kgXref contain this type of data. They can be downloaded from the Table browser or the Downloads area.
http://genome.ucsc.edu/goldenPath/help/hgTablesHelp.html Using the Table browser, the tables are under the track UCSC Genes. Browse these tables and the related tables to learn the schemas (using the "view schema" button) http://genome.ucsc.edu/FAQ/FAQdownloads#download1 On the Downloads server home page, follow the links: Common name -> Assembly -> Annotation Database Using ftp, this is the same path as: goldenPath/<db>/database We hope this helps, Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "parveen dabas" <[email protected]> wrote: > From: "parveen dabas" <[email protected]> > To: [email protected] > Sent: Tuesday, January 12, 2010 10:04:21 PM GMT -08:00 US/Canada Pacific > Subject: [Genome] request for human gene list with aliases and RefSeq ID > > Hello > i have a list of few genes but when i tried to match those genes to > hg17 or > hg18, half of the genes are not present.. Possibly genes present in my > list > are same as that of hg18 but with different names(aliases). So could > you plz > tell me from where i can get the gene genes list with their all > aliases and > RefSeq ID.. I need RefSed ID too, so that i can match the list based > on > RefSed Ids.. > thanks > with Regards > > -- > Parveen Dabas > G. N. Ramachandran Center for Genome Informatics, > Institute of Genomics and Integrative Biology (IGIB), > CSIR Lab, Mall Road, > New Delhi-110007, INDIA > Cell No: +919999840070 > Email: [email protected] > Web: http://www.igib.in > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
