Hello Kyle,

The dbSNP track data would be identical if mirrored correctly.

If you are referring to data in tracks other than dbSNP (RepeatMasker?), then 
that track would also need to be included in the mirror for the annotation to 
be accessible.

Thanks,
Jennifer





------------------------------------------------ 
Jennifer Jackson 
UCSC Genome Bioinformatics Group 

----- "Kyle Tretina" <[email protected]> wrote:

> From: "Kyle Tretina" <[email protected]>
> To: [email protected], "Pattle Pun" <[email protected]>
> Sent: Thursday, February 4, 2010 6:59:33 AM GMT -08:00 US/Canada Pacific
> Subject: Re: [Genome] Automation Question
>
> To whom it may concern,
> 
> The principle investigator of my research team wonders if, by using
> the data
> from the dbSNP130 track, all of the masking information will be
> included
> just like when an SNP is manually entered into the website. Primarily,
> I
> believe his concern is whether a mirror using that track will yield
> the same
> alignment results as when an rs number is entered manually into the
> database
> in general. Could you please clear this up for us?
> 
> 
> Kyle Tretina
> Wheaton College
> _______________________________________________
> Genome maillist  -  [email protected]
> https://lists.soe.ucsc.edu/mailman/listinfo/genome
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