Hi, In displaying blat results, what is the difference between an arrow that links two matches and a squared arrow?
for example, in an image like this (also attached): http://genome.ucsc.edu/trash/hgt/hgt_genome_7c20_c07d60.gif there is first left-hand side block of 7 matching sequences that is linked by arrows, then squared links for the first 3, then the fourth is an arrow, and the last 3 are squared links... etc what is the conceptual difference between arrows and squared links? Cheers, Albert.
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