Hello All,

 

To date, when we want to add a custom track to the Genome Browser using
BAM file, we can enter in the bigDataURL field a HTTP or FTP location as
address where the BAM file and its pair-indexed file are.

We are going to install locally a mirror of the UCSC Genome Browser.

Then, we are going to create and add Custom Tracks to this mirror but
locally.

Is there any possibility to give the address of file on a machine from a
local network (such as
/mymachine/bam_folder/MyBAMs/exp002/mybamfile.bam) into this bigDataUrl
field ?

 

In the meantime, is it possible to customized the lifetime of the tracks
within the local Genome Browser Mirror in order to get more than 48
hours storage?

 

Thanks for your replies

Best Regards,

Dr Christophe LEGENDRE

TGen, PHX, USA

 

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