Hello Maria, Use the UCSC Gene's table kgXref. It contains the UCSC Gene identifier, Genbank accession, gene symbol, RefSeq NM_* and NP_* identifiers and will bring up a linked table into the GO database in the Table browser. As you probably know, RefSeq Genes are a subset UCSC Genes.
Thanks, Jennifer --------------------------------- Jennifer Jackson UCSC Genome Bioinformatics Group http://genome.ucsc.edu/ On 3/4/10 2:55 PM, Maria Poptsova wrote: > Hello, > > Could you please explain how to extract GO terms for RefSeq (or UCSC) > genes. I tried to do it through Tables/intersections, but when I choose > a RefSeq gene table, then click on Intersection, I cannot choose GO > database anymore and hence, I cannot choose GO tables. Maybe you have > already the table I need pre-composed? Please help. > > Maria > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
