Hello,
First of all, I would like to thank you for all of your efforts to make
an extremely useful tool.
I have a problem in wiggle plot that works on our mirror. I attached
two small files to demonstrate the problem. First file chrV.wig.prep has
one peak and peak height is around 20. The second file has
(chrV.wig.prep.2) has two peaks including the peak in the first file.
The distance in the peak regions is around 800 base.
But here the height of first peak is over 100K and the second region is
only 25. So, when I upload the first file, we see the whole region
without any problem. But, in the second file, there is a problem in the
second peak, it only shows after a part of the peak that is, I guess,
after a certain distance from the first peak.
Why are the small peaks deleted in the vicinity of huge peaks? Is it
possible to show all the data?
-----I am using the commands below to upload a wig file.
I use wigEncode to make wib file.
wigEncode chrV.wig.prep ex5.wig ex5.wib
And load them to our mirror in to sacCer2 genome.
hgLoadWiggle sacCer2 ex5 ex5.wig
And copy the file into gbdb
cp ex5.wib to /gbdb/sacCer2/wib/.
And add a row to trackDB to show the track.
----
Thanks in advance,
Best,
Alper Kucukural
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