Dear list, May I have a question about the human genome assembly 19 available at ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/chromosomes/ that whether this genome sequence is repeat-masked or not?If masked, in which way? I know there is another directory to get the same genome sequence (ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/), where contains two assemblies differ in the way to mask repeats, i.e. chromFa.tar.gz and chromFamasked.tar.gz. I am not sure which one corresponds to the genome under /chromosomes directory. Thank you very much in advance!
Regards, Yuan _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
