Dear Vittal, I am assuming that you are using the hg18 database and the track "sno/miRNA". If that is the case, your query looks correct and there should be results. One item to double check is the region setting. If you don't have it set to the entire genome, results may not be returned because there may not be sequences that meet your criteria for that region. If you continue to have problems after the region is set to "genome", try a cart reset (located near the get output button on the table browser page) and try the query again. Hopefully this solves the problem. If this isn't the database or the track you are using, please send us the exact query details so we can replicate what you have done.
Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ----- Original Message ----- From: "Vittal Kurisetty" <[email protected]> To: "[email protected]" <[email protected]> Sent: Thursday, April 8, 2010 8:05:12 AM GMT -08:00 US/Canada Pacific Subject: [Genome] miRNA promoter sequences Hello, I'm trying to use the website http://genome.ucsc.edu/cgi-bin/hgTables? to see the promoters for the miRNAs, but I'm not able to. After using the directions "the filter to pull out the miRNA by selecting "type [does] match "miRNA". Chose the output format as "sequence". On the next screen, chose the "Promoter/Upstream" region, and "get sequence"", there are no results seen. Could you please help.. Thank you very much in advance... Sincerely, Vittal __________________________________________________________________________________________ Vittal Kurisetty, PhD Sylvester Comprehensive Cancer Center University of Miami, School of Medicine Room 105, Papanicolau Building (Fox Annex) 1550 NW 10th Ave, Miami, FL 33136 USA Phone # 001-(305) 243 - 8303; Fax # 001-(305) 243 - 5555 __________________________________________________________________________________________ The information contained in this transmission may contain privileged and confidential information, including information protected by federal and state privacy laws. It is intended only for the use of the person(s) named above. If you are not the intended recipient, you are hereby notified that any review, dissemination, distribution or duplication of this communication is strictly prohibited. If you are not the intended recipient, please contact the sender by reply email and destroy all copies of the original message. _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
