Hi guys,
Any idea how I can get itemRgb working. Attached is part of by bed
file, bed.tab and trackDb.ra. After I run hgLoadBed, by rbg values get
converted into some number and are saved in db in a field called "reserved",
and after running make to create trackDb.tab I don't see any reference of
itemRgb in trackDb.tab.
Perhaps my syntax is incorrect? Help!!!!!!!
Jay
nonCpG.pos.strand.out:
----------------------------------------------------------
chr_1 7344 7345 C:1 0 + 7344 7345 51,51,153
chr_1 7346 7347 C:1 0 + 7346 7347 51,51,153
chr_1 7348 7349 C:1 0 + 7348 7349 51,51,153
chr_1 7357 7358 C:1 0 + 7357 7358 51,51,153
chr_1 7358 7359 C:1 0 + 7358 7359 51,51,153
chr_1 7361 7362 C:2 0 + 7361 7362 51,51,153
chr_1 7371 7372 C:6 0 + 7371 7372 51,51,153
chr_1 7376 7377 C:6 17 + 7376 7377 255,102,51
bed.tab: (created by hgLoadBed)
----------------------------------------------------------
585 chr_1 7344 7345 C:1 0 + 7344 7345 3355545
585 chr_1 7346 7347 C:1 0 + 7346 7347 3355545
585 chr_1 7348 7349 C:1 0 + 7348 7349 3355545
585 chr_1 7357 7358 C:1 0 + 7357 7358 3355545
585 chr_1 7358 7359 C:1 0 + 7358 7359 3355545
585 chr_1 7361 7362 C:2 0 + 7361 7362 3355545
585 chr_1 7371 7372 C:6 0 + 7371 7372 3355545
585 chr_1 7376 7377 C:6 17 + 7376 7377 16737843
trackDb.ra entry:
----------------------------------------------------------
track bsNonCpGPos
shortLabel Non-CpG Region +ive
longLabel RMAPBS raw out of non-CpG region +ive strand
group mthy
priority 8
visibility dense
itemRgb on
type bed 9 .
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