Hello Max,

We are sorry to report that we do not have a command-line version of the 
web utility.

Thank you,
Jen

---------------------------------
Jennifer Jackson
UCSC Genome Informatics Group
http://genome.ucsc.edu/

On 4/7/10 10:10 AM, Maximilian Haussler wrote:
> Hi gurus,
>
> I wanted to correlate all encode tracks against each other and some local
> chip seq tracks.The table browser can "correlate" tracks and Adam Siepel
> seem to have mentioned correlation (src/hg/overlapSelect/todo.txt)
>
> I wonder if it is possible to directly correlate tracks with a command line
> tool? I've hacked something together, by combining featureBits and
> overlapSelect, but, given that the function exists in the table browser, you
> might perhaps have a command line tool for this... ?
>
> thanks once again
> Max
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