Good Morning zhangkun: Please review the discussion of the MySQL setup in the source tree file: src/product/README.mysql.setup Check your MySQL user name and password in your cgi-bin/hg.conf configuration file. Use that hg.conf file as your private $HOME/.hg.conf file and see if the kent command hgsql can talk to the MySQL server from the command line. hgsql is merely the same thing as using the 'mysql' command but it uses the MySQL user name and password as specified in your $HOME/.hg.conf file. If that works, try running hgTracks on the command line to see if runs to a successful finish.
--Hiram 张昆 wrote: > Hello, > > Please help me out here. We are trying to install the Genome Browser > on our server, > but the following error occurred when visiting the webpage: > > *Couldn't connect to database ce6 on 10.28.0.213 as ibm. > Can't connect to MySQL server on '10.28.0.213' (110)* > > The server can connect to the "hgcentral" database, and both settings > of these two databases > are same, then how can this happen? I typed the command "hgGateway" and > found the process > ended here: > * > SQL_TIME 86 hgcentral 0.000s > SQL_FETCH 86 hgcentral 0.000s > SQL_QUERY 86 hgcentral select scientificName from dbDb where name = 'ce6' > SQL_TIME 86 hgcentral 0.000s > SQL_FETCH 86 hgcentral 0.000s* > > I want to know how to solve this problem. > Thanks! > > > Best wishes > > zhangkun _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
