Hi Jennifer, Thanks for the information. regards, Vipin T S
On 3 May 2010 23:30, Jennifer Jackson <[email protected]> wrote: > Hello - > > The last two fields are > > f11) block sizes > f12) block starts > > FAQ for BED format: > http://genome-test.cse.ucsc.edu/FAQ/FAQformat.html#format1 > > Coordinate system defined (zero-based, half-open): > http://genomewiki.ucsc.edu/index.php/Coordinate_Transforms > > Hopefully this helps, > Jennifer > > --------------------------------- > Jennifer Jackson > UCSC Genome Informatics Group > http://genome.ucsc.edu/ > > > On 5/3/10 2:11 PM, Vipin TS wrote: > >> Hi UCSC Genome browser team, >> >> I was analyzing the BED file architecture, and I am finding difficulty in >> recognizing the last two fields in a BED file. Here I am pasting the file >> content. >> >> track name="BED track" description="BED format custom track example" >> visibility=2 color=0,128,0 useScore=1 >> chr22 1000 5000 itemA 960 + 1100 4700 0 2 1567,1488, 0,2512 >> chr22 2000 7000 itemB 200 - 2200 6950 0 4 433,100,550,1500 0,500,2000,3500 >> >> I am confused about the last two fields of this BED file. Please let me >> know >> the details. >> >> many thanks, Vipin T S >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
