Hello Sarang, Main browser: http://genome.ucsc.edu/ Test browser: http://genome-test.cse.ucsc.edu/
For the genomes contained in the UCSC browsers, you can download genome sequence from the Downloads server (all main browser genomes, some test browser genomes) or using the Table browser (all main browser genomes and test browser genomes, for smaller regions). Please note that the test browser is actively used for development purposes and is not curated/quality verified - data can be used, but with some caution. Downloads server: http://hgdownload.cse.ucsc.edu/downloads.html Help1: http://genome.ucsc.edu/goldenPath/help/hgTracksHelp.html#Download Help2: http://genome.ucsc.edu/FAQ/FAQdownloads.html#download32 Hopefully this helps you to obtain the data you wanted from UCSC. Thanks, Jennifer --------------------------------- Jennifer Jackson UCSC Genome Informatics Group http://genome.ucsc.edu/ On 5/18/10 4:43 AM, sarang wrote: > Dear Sir/Madam > I am Sarang Limaye, PhD student of Prof. Kelm at University of Bremen, > Germany. I am working with CD33 related Siglecs which are expressed on > mononuclear phagocytes. I need to assemble genome variant information > for these Siglecs. While looking for known human genomes I came across > your website/database. Can you please help me to get sequence data for > following Siglecs? Is it possible to get data for all the individuals > who are listed on your database? Please guide me and help me to complete > my research. > Thanking you in anticipation. > > With best wishes > Sarang Limaye > > P.S: > I need following data; if I get complete chromosome 19 sequence I will > be able to extract necessary information. (following 20 individuals) > • Siglec-1 chr20:3,662,579-3,692,814 > • Siglec-3 chr19:51,728,335-51,743,274 > • Siglec-5 chr19:52,114,782-52,133,727 > • Siglec-7 chr19:51,645,558-51,656,783 > • Siglec-8 chr19:51,954,252-51,961,708 > • Sigelc-9 chr19:51,628,165-51,633,566 > • Siglec-10chr19:51,913,276-51,921,451 > Publicly released genome sequences of several individuals: > • !Gubi (KB1), > • G/aq'o (NB1), > • !Ai (MD8), > • D#kgao (TK1), > • Archbishop Desmond Tutu (ABT), > • Craig Venter, > • James Watson, > • Anonymous Yoruba individual NA18507, > • Anonymous Han Chinese individual (YH, YanHaung Project), > • Seong-Jim Kim (SJK), > • 6 individuals from the 1000 Genome Project high-coverage pilot: > • a CEU daughter and parents (NA12878, NA12891, NA12892) > • a YRI daughter and parents (NA19240, NA19238, NA19239) > • Anonymous Korean individual (AK1), > • Stephen Quake, > • George Church (NA20431), > • Extinct Palaeo-Eskimo Saqqaq individual > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
