If I blat a sequence with 'NN' at the end. Genome browser will show a
purple bar at the end (indicating mismatch?). But the bar is too small
not matter how big I zoom in. It is really an eye exercise.

May I suggest to increase the bar size?

Similar issues can be found for EST's with polyA tails. The bar is
also too small to see.

-- 
Regards,
Peng
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