Apologies, I sent this answer to the wrong person.

Hello Tiandao,
Unfortunately, it is not. The best alternative would be to create 
multiple WIG tracks and display them simultaneously.
This can be done in one file like in the example near the bottom of this 
page:
http://genome.ucsc.edu/goldenPath/help/wiggle.html

Please feel welcome to contact us again with further inquiries.

Antonio Coelho
UCSC Genome Bioinformatics Group


Tiandao Li wrote:
> Hello,
>
> Is it possible to include different colors for different regions (no
> overlap) on the same chr in one custom wig track?
>
> Thanks,
>
> Tiandao
> _______________________________________________
> Genome maillist  -  [email protected]
> https://lists.soe.ucsc.edu/mailman/listinfo/genome
>   

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