Hello Nauman, The CPG island predictions are indeed done on a repeat masked genome. Please contact us again if you have further inquiries.
Best, Antonio Coelho UCSC Genome Bioinformatics Group Maqbool, Nauman wrote: > Hi > > I was wondering about the CpG island predictions, done by the UCSC team, if > these are done on a repeat masked genome? I am particularly interested in the > CpG island predictions of the bovine genome (BTau4). > > Regards > > Nauman > > ____________________________ > Nauman Maqbool PhD > Team Leader > Bioinformatics > T +64 7 838 5043 > E [email protected] > > > AgResearch Limited > Ruakura Research Centre > East Street, Private Bag 3123, Hamilton, New Zealand > T +64 7 856 2836 > F +64 7 838 5012 > www.agresearch.co.nz > AgResearch - Farming Food and Health. First > Te Ahuwhenua Te Kai me te Whai Ora. Tuatahi > > > ======================================================================= > Attention: The information contained in this message and/or attachments > from AgResearch Limited is intended only for the persons or entities > to which it is addressed and may contain confidential and/or privileged > material. Any review, retransmission, dissemination or other use of, or > taking of any action in reliance upon, this information by persons or > entities other than the intended recipients is prohibited by AgResearch > Limited. If you have received this message in error, please notify the > sender immediately. > ======================================================================= > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
