From the public MySQL server: $ mysql --user=genome --host=genome-mysql.cse.ucsc.edu \ -A -e "select chrom,chromStart,chromEnd,type from gap;" hg18
Or, from the tables browser at genome.ucsc.edu Use the "gap" table. --Hiram Qianqian Zhu wrote: > Hi, > > I'm wondering where can I obtain the locations of assembly gaps in hg18. > Thank you! > > Sincerely, > Qianqian > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
