The -ooc argument to blat requires a file name following it. The name can be anything. We typically name .ooc files by the tile size they were originally so we know what they are. You can name them anything you want. 11.ooc means it was created with tile size of 11.
--Hiram Peng Yu wrote: > According to the help of blat, it seems that N has to be a number that > is the same as the tile size? > > But I changed the filename from N.ooc to somename that doesn't start > with a number. It seems that blat still runs and the runtime is the > same as when the filename is N.ooc. Could you let me know if N in > N.ooc has to be the tile size? _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
