Hello Jennifer Thank you for your swift reply and thanks for the excelent tool that is the Genome Browser.
Edson > > -------------------------------------------------- > From: "Jennifer Jackson" <[email protected]> > Sent: Tuesday, June 22, 2010 10:37 PM > To: "Edson Luiz Folador" <[email protected]> > Cc: <[email protected]> > Subject: Re: [Genome] Genome Browser right zoom > >> Hello again, >> >> We have dug in a little more and determined that this is indeed a bug >> that we can fix. You can expect the correction to be released fairly >> soon. If you still notice it in a few weeks, please feel free to write >> back for an update. >> >> Thank you for reporting the problem! >> >> Jen >> >> On 6/22/10 1:30 PM, Jennifer Jackson wrote: >>> Hello Edson, >>> >>> After evaluating your test case, we have determined that the results you >>> are describing are probably due to rounding-off of the coordinate >>> numbers used when the browser is calculating how much to >>> zoom-in/zoom-out. This should result in only occasional and small (one >>> or two bases) changes in position. Unfortunately, increasing the >>> precision cannot be done in a practical way. >>> >>> We apologize for any inconvenience this may have caused you and thank >>> you for the feedback! >>> >>> Please feel free to contact the help mailing list again if you require >>> further assistance. >>> >>> Best regards, >>> Jen >>> >>> UCSC Genome Browser Support >>> http://genome.ucsc.edu/contacts.html >>> [email protected] [email protected] >>> >>> On 6/22/10 10:33 AM, Edson Luiz Folador wrote: >>>> Hi, >>>> >>>> I believe that I found a little problem with the ability to zoom in >>>> using the mouse to pre-select the desired region, could you tell me if >>>> it's a feature or a bug ? >>>> >>>> When I enter 2 coordinates on the genome browser (eg: >>>> chr11:64,275,702-64,276,014), is displays the region correctly. >>>> However, if I try to zoom in on the right part of the sequence by >>>> selecting the region with the mouse, the coordinates reached 1 extra >>>> basepair to 64,276,015. This does not seem to happen when the left part >>>> of the sequence. >>>> >>>> Maybe this occurs only when there is an intron in the region of >>>> interest ? >>>> >>>> Thank you, >>>> >>>> Edson Luiz Folador >>>> INCA - Instituto Nacional do Cancer >>>> CPQ - Centro de Pesquisa >>>> Laboratório de Bioinformática e Biologia Computacional >>>> Analista em Bioinformática - DBA PostgreSQL >>>> +55 21 3233-1343 >>>> >>>> _______________________________________________ >>>> Genome maillist - [email protected] >>>> https://lists.soe.ucsc.edu/mailman/listinfo/genome >>> _______________________________________________ >>> Genome maillist - [email protected] >>> https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
