Hello Giorgio,
You can try uploading your data as a custom track here:
http://genome.ucsc.edu/cgi-bin/hgCustom
You can read about custom tracks here:
http://genome.ucsc.edu/goldenPath/help/customTrack.html
The track types that are mostly likely to suit your needs are WIG:
http://genome.ucsc.edu/goldenPath/help/wiggle.html
or bedGraph:
http://genome.ucsc.edu/goldenPath/help/bedgraph.html
I hope this helps you get started, please don't hesitate to contact us
again if you have further inquiries.
Best
Antonio Coelho
UCSC Genome Bioinformatics Group
Giorgio GIURATO wrote:
> Hi,
> i am Giorgio Giurato, a PhD student at Second University of Naples.
> In my studies i am analysing ChIP-Seq data to find TF bining site.
> Recently, some papers display tag-density, as Stunnenberg in his paper
> "Whole-genome DNA methylation profiling using MethylCap-seq" figure 2.
> Is possible to use Genome Browser to obtain this kind of figure? If yes, can
> you tell me how , or suggest some papers explain that?
> I wait for your answer,
> Best Regards,
> Giorgio Giurato
>
> ++++++++++++++++++++++++++++++++++++++++++++++++++
> Giurato Giorgio, PhD student
> Dipartimento di Patologia Generale
> Seconda Università degli Studi di Napoli
> Vico L. De Crecchio, 7
> 80138 Napoli (Italy)
> Tel +39 081 566-7663/7566
> Mobile +39 335 8045658
> Fax +39 081 441655
> VoIP Skype sallusti10
>
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