Hello, I was just wondering if the the Chimp genome assembly in .2bit format is RepeatMasked or not? Reason: When I do a BLAT search on the chimp genomic sequence in .2bit format, I do not see any genomic hits for my query, but if I do the same on the RepeatMasked genomic data (sequences of genomic repeats in chimps), I do find a match.
Thanks, Jeffrey _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
