Hi,

Thanks for reply!

I am now clear with my problems.

And the question mark in ensembl means they do not have the genome 
sequence of that species now.

Best regards,
Xie


Vanessa Kirkup Swing 写道:
> Dear Xie,
>
> It appears that Ensembl is speculating (with the ?) that Papio hamadryas is 
> in the same subfamily, Cercopithecinae, as Macaca mulatta. I would suggest 
> contacting Ensembl to find out what they mean by the ?. Other sources, such 
> as the Taxonomy browser at NCBI, also have them under the same subfamily. 
>
> You can see the NCBI lineage at:
>
> http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9557&lvl=3&keep=1&srchmode=1&unlock&lin=s
> http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=9544&lvl=3&keep=1&srchmode=1&unlock&lin=s
>
>
> To learn more about how the our image 
> (http://genome.ucsc.edu/images/phylo/hg19_46way.gif) was generated, please 
> see our wiki page:
>
> http://genomewiki.ucsc.edu/index.php/Human/hg19/GRCh37_46-way_multiple_alignment
>
>
> If this doesn't answer your question, I would recommend consulting the 
> appropriate scientific literature to get the latest taxonomic information.
>
> If you have further questions, please contact the mailing list.
>
> Vanessa Kirkup Swing
> UCSC Bioinformatics Group
>
> ----- Original Message -----
> From: "Chen Xie" <[email protected]>
> To: [email protected]
> Sent: Saturday, July 24, 2010 9:32:44 PM GMT -08:00 US/Canada Pacific
> Subject: [Genome] please help for
>
> Hi,
>
> The phylogeny relationship of "Baboon" in the figure
> (http://genome.ucsc.edu/images/phylo/hg19_46way.gif ) in "Vertebrate
> Multiz Alignment & Conservation (46 Species)" is different from the
> counterpart in ensembl
> (http://www.phylowidget.org/full/index.html?tree=http://tinyurl.com/ensembltree&useBranchLengths=true&minTextSize=7
> ).
>
> I want to know which one is right.
>
> Thanks very much!
>
> Best wishes,
> Xie
> _______________________________________________
> Genome maillist  -  [email protected]
> https://lists.soe.ucsc.edu/mailman/listinfo/genome
>
>   

_______________________________________________
Genome maillist  -  [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome

Reply via email to