Hi Maayan, I'm sorry, but for all the tracks I looked at (hg19, hg18 and mm9 for UCSC Genes, RefSeq Genes or Ensembl Genes), the table schema correctly labeled the exon start and exon end rows as "exonStarts" and "exonEnds". Could you please let me know which assembly and track you were using? Also, are you viewing the tables through the track description page, through the table browser, on our public mysql server or on our downloads server?
Best, Mary ------------------ Mary Goldman UCSC Bioinformatics Group On 7/29/10 2:00 AM, maayan kreitzman wrote: > Hi there, > The table schema described for the refgene tables (gene prediction tracks - > UCSC genes, or ensemble genes) don't match the tables themselves. The > columns are in different orders, and have different content. For instance, > in the table schema, the last two columns are exon starts and exon ends. In > the actual tables, the columns are exon lengths and exon starts. > It would be great if the descriptions actually matched the tables. > maayan > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
