Hello,
I am analyzing a genome-wide dataset of protein location coordinates in the following format and want to know if they can be converted to the gene that they are most closely located next to: chr1:3002834-3002851 chr1:4132776-4132783 chr1:4322743-4322748 chr2:155204062-155204080 chr2:155207569-155207570 chr2:155209754-155209758 chr2:155275773-155275774 chr2:155311478-155311484 The coordinates are derived from the mm8, Feb 2006, Build 36 genome build. I would like to know if the UCSC table browser has a batch function that enables conversion of these coordinates into the gene descriptions or gene symbols that the binding sites are positioned near (either within the gene bodies or intergenically). Thank you, Satya -- _________________________ Satyabrata Das, Ph.D. Postdoctoral Research Scholar (Levasseur Lab) Department of Internal Medicine University of Iowa, Carver College of Medicine Carver Biomedical Research Building, Rm. 3256-8 285 Newton Road Iowa City, IA 52242 phone: 319-384-4608 e-mail: [email protected] _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
