Dear Paul, Depending on which variant of NF2 you are interested in there are slightly different coordinates.
1)To make sure that you are using the latest assembly start from this page: http://genome.ucsc.edu/cgi-bin/hgGateway?clade=mammal&org=Human&db=hg19 Make sure that the assembly is set to hg19 (the latest assembly). 2) Type "NF2" into the box that says "position or search term" 3) It will display these search results: http://genome.ucsc.edu/cgi-bin/hgTracks?clade=mammal&org=Human&db=hg19&position=NF2&hgt.suggest=&pix=1000&Submit=submit I hope that this helps. If you have further questions, please don't hesitate to contact the mailing list again. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ----- Original Message ----- From: "PAUL J BENKE, MD" <[email protected]> To: [email protected] Sent: Thursday, September 2, 2010 10:15:21 AM GMT -08:00 US/Canada Pacific Subject: [Genome] interval 22 I have a patient with a deletion of chromosome 22q, determined by microarray (Athena) The company tells me that NF2 is in this interval, but I find NF2 only nearby per your browser Athena tells me a more up to date rendering of your genome browser has NF2 in the interval. First, how do I switch from one rendering of the genome to another. Second, is NF2 in this interval? 22q 26,898,825-28,530,899 Thanks very much. paulbenke _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
