Hi Feng, The best way to get the sequence for all the UCSC Genes is to use our Table Browser (http://genome.ucsc.edu/cgi-bin/hgTables). First, select your clade, genome and assembly of interest. Next, select the "Genes and Gene Prediction Tracks" from the group menu - "UCSC Genes" should be automatically selected as the track. Next, select "sequence" from the output format drop down menu and click "get output". Configure the output display and click "get sequence".
I hope this information is helpful. Please feel free to contact the mail list again if you require further assistance. Best, Mary ------------------ Mary Goldman UCSC Bioinformatics Group On 9/1/10 3:48 PM, Huichen Feng wrote: > Hi, I'd like to know whether I can download all UCSC genes (all sequences) > into local machine. Thank you very much for your helpful suggestions. > Sincerely, Feng > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
