Hello Shreya,

Unfortunately, we do not offer the Chlamydomonas reinhardtii genome on 
our browser.

However, there are other primer design programs out there.  For example, 
I believe that the primer3plus program lets you upload a genome and set 
up primers.  Their website is:
http://www.bioinformatics.nl/cgi-bin/primer3plus/primer3plus.cgi

Good luck,
Kayla Smith
UCSC Genome Bioinformatics Group

shreya nishita wrote:
> Hello,
> I am Shreya, doing my graduation.I have synthesized cDNA from the total 
> RNA..I am trying to deisgn primers that can specifically amplify my cDNA of 
> interest.I failed in amplifying anything from the cDNA. Now,I wanted to use 
> your in-silico technique to save some time.
>  My question is :
> 1.I am working with Chlamydomonas reinhardtii. It is not listed to search if 
> my primer actually work or not.
> 2.Is there any option so that I know the exact length that can be amplified 
> using my primers.
> I will be thankful if you can mail me. I will appreciate any sort guidance or 
> suggestion.
> Thank you in advance,
> Shreya
> 
> 
> 
> 
> 
>       
> _______________________________________________
> Genome maillist  -  [email protected]
> http://www.soe.ucsc.edu/mailman/listinfo/genome

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