Hi, I have a about 3000 mouse (mm8) genomic regions (2000bps on average) identified by ChIP-seq experiment downloaded from a public data set. And i want to convert these coordinates to those of human (hg18). However, i got nothing returned using the liftover webserver in ucsc genome website. So i downloaded the liftover program and run it locally. Again, only about 400 of these regions were successfully converted, others were reported as "Partially deleted in new". Any suggestions?
Best, Jiantao Shi _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
