Hi Kayla,

Thank you for your message. 

Using autoscale=off  along viewLimts=0:25 sets the scale for the entire track. 

Is it possible to have a dynamic scaling for the part of the tracks currently 
being viewed and apply the same dynamic scaling to 2 tracks? That is, for the 
part of the track currently being viewed, one would obtain the maximum 
value and minimum value after comparing the two tracks. Then, set the scale on 
both the tracks to this maximum and minimum. This will enable us to have both 
the tracks with the same scale obtained dynamically for the current viewing 
area. 

-Dhiral.




________________________________
From: Kayla Smith <[email protected]>
To: Dhiral Phadke <[email protected]>
Cc: Ruchir Shah <[email protected]>; Dhiral Phadke <[email protected]>; 
[email protected]
Sent: Thursday, May 28, 2009 2:53:50 PM
Subject: Re: [Genome] Scaling the y-axis for custom tracks


Hello Dhiral,

Here is a page with information on how to make wiggle custom tracks:
http://genome.ucsc.edu/goldenPath/help/wiggle.html

You'll need to turn off autoScale, and set the view limits for each custom 
track:

An example of the syntax is here (from the page linked above):

autoScale=off viewLimits=0.0:25.0

I hope this information is helpful to you.  Please don't hesitate to contact us 
again if you require further assistance.

Kayla Smith
UCSC Genome Bioinformatics Group


----- "Dhiral Phadke" <[email protected]> wrote:

> Hi,
> 
> We have uploaded custom tracks on the UCSC genome browser. Is their a
> way to display 2 tracks with the same scale on the y-axis? 
> 
> Thanks a lot for your help.
> 
> -Dhiral.
> 
> 
>      
> _______________________________________________
> Genome maillist  -  [email protected]
> https://lists.soe.ucsc.edu/mailman/listinfo/genome



      
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