Hi, I am working on the following session : http://genome.ucsc.edu/cgi-bin/hgTracks?hgS_doOtherUser=submit&hgS_otherUserName=Jwassers%20mcgill&hgS_otherUserSessionName=jcrary_TOD_study.hap2
When using the Table browser to intersect in Custom Tracks *1059.snps* chr17_ctg5_hap1 759070 759071 T 1000 . 759070 759071 87,87,87 chr17_ctg5_hap1 761175 761176 C 1000 . 761175 761176 87,87,87 chr17_ctg5_hap1 764678 764679 A 1000 . 764678 764679 87,87,87 *with* *H2>H1 diff *I lose the color (9th column) in the BED output. Actually it is replaced with a number that I don't understand : chr17_ctg5_hap1 758728 758729 C 1000 . 758728 758729 2631897 chr17_ctg5_hap1 758788 758789 G 1000 . 758788 758789 2631897 chr17_ctg5_hap1 759070 759071 T 1000 . 759070 759071 2631897 chr17_ctg5_hap1 759070 759071 T 1000 . 759070 759071 5723991 Any help would be appreciated, Thanks Jessica -- Jessica Wasserscheid Bioinformatician, Vervet Monkey Genomics Project http://www.genomequebec.mcgill.ca/compgen/submit_db/vervet_project McGill University & Genome Quebec Innovation Center 740 Dr. Penfield Avenue Room 7211 Montreal, Quebec Canada, H3A 1A4 Email : [email protected] Phone : (001) 514-398-3311 #00476 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
