Hi Haojam, On the Table Browser select (Clade/Genome/Assembly): Mammal/Pig/susScr2 and...
group: Gene and Gene prediction tracks track: UCSC Genes table: knownGene region: genome (usually), or position to limit the search identifiers (names/accessions): click on "paste list" and paste in the identifiers following the instructions. (if applicable) output format: sequence Click get output On the next screen select "genomic" to get the exons, or "mRNA" to get mRNA sequence. If you select genomic, on the following screen, make sure only the boxes for these options are checked: 5' UTR Exons CDS Exons 3' UTR Exons ...and then click "get sequence". If you have further questions, please contact us again at [email protected] - Greg Roe UCSC Genome Bioinformatics Group On 4/11/11 2:17 AM, 하오잠 로 wrote: > Dear Sir, > > I would like to retrieve 5'UTR, 3'UTR, and CDS mRNA genomic locations or > regions from UCSC table browser for hg19. Could you please guide me how to do > this? > > Regards, > Haojam Rocky > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
