Hi JaeBum, Thank you for the compliments on the Genome Browser.
I tried uploading our example bedGraph custom track (from the bottom of this page: http://genome.ucsc.edu/goldenPath/help/bedgraph.html), and I am able to adjust the vertical viewing range without problems. If you upload the sample track, do the settings work correctly for you? If the problem is just limited to a specific custom track, please send me your track definition line (you can send it just to me instead of the whole list if you like), and we will try to reproduce the problem here. -- Brooke Rhead UCSC Genome Bioinformatics Group 배재범 wrote on 4/9/11 6:42 AM: > Hello > > Hi > > Thank for your effort in maintaining this fantastic UCSC site > I am try to use bedGraph upload in UCSC genome browser > > But I found some difficulty in setting Data view Scaling > when I try to set above option as use vertical viewing range setting and > select vertical range limit as max 10 > > but in the UCSC browser the y max range alawys goes back to 1000 ( min is 0) > > So dou you have any idea for setting vertical viewing range setting as user > selected options? > > Thank youfor your help in advance > > JaeBum Bae > > Yonsei Genome Institute , Yonsei University, Seoul, KOREA > > Research Professor > > > *Cyst_P2_22* > > *Display mode: * hide dense full > > Type of graph: points bar Track height: pixels (range: 11 to 30) Vertical > viewing range: min: max: (range: 0 to 1000) Data view scaling: use > vertical viewing range setting auto-scale to data view Always include zero: > OFF ON Transform function: Transform data points by: NONE LOG > (ln(1+x)) Windowing > function: mean+whiskers maximum mean minimum Smoothing window: OFF 2 3 4 5 6 > 7 8 9 10 11 12 13 14 15 16 pixels *Draw y indicator lines:* at y = 0.0: ON > OFF at y = OFF ON > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
